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中文 EN

Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr03G002927

染色体: Chr03 坐标: 46032188-46037115 链方向: + 类型: protein_coding

基本信息

统一新 Gene IDSmilChr03G002927
名称SmilChr03G002927
描述inositol-tetrakisphosphate 1-kinase 2
染色体 / SeqIDChr03 / NC_080389.1
坐标与链方向46032188 - 46037115 / +

ID 对照

NCBI Gene IDLOC131016107
GeneID131016107
locus_tag-
NCBI NameLOC131016107
原始查询LOC131016107

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述inositol-tetrakisphosphate 1-kinase 2
产物inositol-tetrakisphosphate 1-kinase 2
ArabidopsisAT5G16760 (ITPK1)
Inositol 1,3,4-trisphosphate 5/6-kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:831539]
identity=55.7; qcov=0.988; evalue=1.13e-120; confidence=high
RiceOs10g0576100 (OsITPK5)
-
identity=54.5; qcov=1.03; evalue=2.5e-119; confidence=high
GOGO:0000287 (magnesium ion binding); GO:0005524 (ATP binding); GO:0005737 (cytoplasm); GO:0032957 (inositol trisphosphate metabolic process); GO:0047325 (inositol-3,4,5,6-tetrakisphosphate 1-kinase activity); GO:0052725 (inositol-1,3,4-trisphosphate 6-kinase activity); GO:0052726 (inositol-1,3,4-trisphosphate 5-kinase activity)
KEGGsmil00562 (Inositol phosphate metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil04070 (Phosphatidylinositol signaling system - Salvia miltiorrhiza (redroot sage))
PfamPF05770 (Ins134_P3_kin); PF17927 (Ins134_P3_kin_N)
InterPro-
eggNOG-
NRGeneID:131016107

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Nucleus 细胞核 1.00000 XP_057800680.1
2 Cytoplasm 细胞质 1.00000 XP_057800680.1
3 Cytosol 细胞质基质 1.00000 XP_057800680.1
4 Chromosome 染色体 0.00000 XP_057800680.1
5 Centromere 着丝粒 0.00000 XP_057800680.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置 REF ALT 类型 影响 携带材料数 材料
Chr3:46032878 G A EMS_canonical_SNV CDS_variant 1 B104
Chr3:46033253 G A EMS_canonical_SNV CDS_variant 1 B131

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057800680.1
322 aa
N
1
161
322
Ins134_P3_kin_N
Ins134_P3_kin
C
PF17927 Ins134_P3_kin_N 10-89 aa PF05770 Ins134_P3_kin 112-309 aa
XP_057800681.1
322 aa
N
1
161
322
Ins134_P3_kin_N
Ins134_P3_kin
C
PF17927 Ins134_P3_kin_N 10-89 aa PF05770 Ins134_P3_kin 112-309 aa
XP_057800682.1
322 aa
N
1
161
322
Ins134_P3_kin_N
Ins134_P3_kin
C
PF17927 Ins134_P3_kin_N 10-89 aa PF05770 Ins134_P3_kin 112-309 aa
XP_057800683.1
322 aa
N
1
161
322
Ins134_P3_kin_N
Ins134_P3_kin
C
PF17927 Ins134_P3_kin_N 10-89 aa PF05770 Ins134_P3_kin 112-309 aa
XP_057800685.1
322 aa
N
1
161
322
Ins134_P3_kin_N
Ins134_P3_kin
C
PF17927 Ins134_P3_kin_N 10-89 aa PF05770 Ins134_P3_kin 112-309 aa
XP_057800686.1
322 aa
N
1
161
322
Ins134_P3_kin_N
Ins134_P3_kin
C
PF17927 Ins134_P3_kin_N 10-89 aa PF05770 Ins134_P3_kin 112-309 aa
XP_057800687.1
322 aa
N
1
161
322
Ins134_P3_kin_N
Ins134_P3_kin
C
PF17927 Ins134_P3_kin_N 10-89 aa PF05770 Ins134_P3_kin 112-309 aa
XP_057800688.1
322 aa
N
1
161
322
Ins134_P3_kin_N
Ins134_P3_kin
C
PF17927 Ins134_P3_kin_N 10-89 aa PF05770 Ins134_P3_kin 112-309 aa
XP_057800689.1
322 aa
N
1
161
322
Ins134_P3_kin_N
Ins134_P3_kin
C
PF17927 Ins134_P3_kin_N 10-89 aa PF05770 Ins134_P3_kin 112-309 aa
XP_057800690.1
322 aa
N
1
161
322
Ins134_P3_kin_N
Ins134_P3_kin
C
PF17927 Ins134_P3_kin_N 10-89 aa PF05770 Ins134_P3_kin 112-309 aa
XP_057800691.1
322 aa
N
1
161
322
Ins134_P3_kin_N
Ins134_P3_kin
C
PF17927 Ins134_P3_kin_N 10-89 aa PF05770 Ins134_P3_kin 112-309 aa
XP_057800692.1
322 aa
N
1
161
322
Ins134_P3_kin_N
Ins134_P3_kin
C
PF17927 Ins134_P3_kin_N 10-89 aa PF05770 Ins134_P3_kin 112-309 aa
XP_057800693.1
322 aa
N
1
161
322
Ins134_P3_kin_N
Ins134_P3_kin
C
PF17927 Ins134_P3_kin_N 10-89 aa PF05770 Ins134_P3_kin 112-309 aa
XP_057800694.1
322 aa
N
1
161
322
Ins134_P3_kin_N
Ins134_P3_kin
C
PF17927 Ins134_P3_kin_N 10-89 aa PF05770 Ins134_P3_kin 112-309 aa
XP_057800696.1
322 aa
N
1
161
322
Ins134_P3_kin_N
Ins134_P3_kin
C
PF17927 Ins134_P3_kin_N 10-89 aa PF05770 Ins134_P3_kin 112-309 aa
XP_057800697.1
322 aa
N
1
161
322
Ins134_P3_kin_N
Ins134_P3_kin
C
PF17927 Ins134_P3_kin_N 10-89 aa PF05770 Ins134_P3_kin 112-309 aa
XP_057800698.1
322 aa
N
1
161
322
Ins134_P3_kin_N
Ins134_P3_kin
C
PF17927 Ins134_P3_kin_N 10-89 aa PF05770 Ins134_P3_kin 112-309 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057800680.1 Pfam PF17927 Ins134_P3_kin_N Domain 10 89 6.6e-28 97.7 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
XP_057800680.1 Pfam PF05770 Ins134_P3_kin Domain 112 309 6.9e-77 258.2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
XP_057800681.1 Pfam PF17927 Ins134_P3_kin_N Domain 10 89 6.6e-28 97.7 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
XP_057800681.1 Pfam PF05770 Ins134_P3_kin Domain 112 309 6.9e-77 258.2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
XP_057800682.1 Pfam PF17927 Ins134_P3_kin_N Domain 10 89 6.6e-28 97.7 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
XP_057800682.1 Pfam PF05770 Ins134_P3_kin Domain 112 309 6.9e-77 258.2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
XP_057800683.1 Pfam PF17927 Ins134_P3_kin_N Domain 10 89 6.6e-28 97.7 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
XP_057800683.1 Pfam PF05770 Ins134_P3_kin Domain 112 309 6.9e-77 258.2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
XP_057800685.1 Pfam PF17927 Ins134_P3_kin_N Domain 10 89 6.6e-28 97.7 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
XP_057800685.1 Pfam PF05770 Ins134_P3_kin Domain 112 309 6.9e-77 258.2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
XP_057800686.1 Pfam PF17927 Ins134_P3_kin_N Domain 10 89 6.6e-28 97.7 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
XP_057800686.1 Pfam PF05770 Ins134_P3_kin Domain 112 309 6.9e-77 258.2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
XP_057800687.1 Pfam PF17927 Ins134_P3_kin_N Domain 10 89 6.6e-28 97.7 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
XP_057800687.1 Pfam PF05770 Ins134_P3_kin Domain 112 309 6.9e-77 258.2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
XP_057800688.1 Pfam PF17927 Ins134_P3_kin_N Domain 10 89 6.6e-28 97.7 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
XP_057800688.1 Pfam PF05770 Ins134_P3_kin Domain 112 309 6.9e-77 258.2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
XP_057800689.1 Pfam PF17927 Ins134_P3_kin_N Domain 10 89 6.6e-28 97.7 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
XP_057800689.1 Pfam PF05770 Ins134_P3_kin Domain 112 309 6.9e-77 258.2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
XP_057800690.1 Pfam PF17927 Ins134_P3_kin_N Domain 10 89 6.6e-28 97.7 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
XP_057800690.1 Pfam PF05770 Ins134_P3_kin Domain 112 309 6.9e-77 258.2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
XP_057800691.1 Pfam PF17927 Ins134_P3_kin_N Domain 10 89 6.6e-28 97.7 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
XP_057800691.1 Pfam PF05770 Ins134_P3_kin Domain 112 309 6.9e-77 258.2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
XP_057800692.1 Pfam PF17927 Ins134_P3_kin_N Domain 10 89 6.6e-28 97.7 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
XP_057800692.1 Pfam PF05770 Ins134_P3_kin Domain 112 309 6.9e-77 258.2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
XP_057800693.1 Pfam PF17927 Ins134_P3_kin_N Domain 10 89 6.6e-28 97.7 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
XP_057800693.1 Pfam PF05770 Ins134_P3_kin Domain 112 309 6.9e-77 258.2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
XP_057800694.1 Pfam PF17927 Ins134_P3_kin_N Domain 10 89 6.6e-28 97.7 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
XP_057800694.1 Pfam PF05770 Ins134_P3_kin Domain 112 309 6.9e-77 258.2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
XP_057800696.1 Pfam PF17927 Ins134_P3_kin_N Domain 10 89 6.6e-28 97.7 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
XP_057800696.1 Pfam PF05770 Ins134_P3_kin Domain 112 309 6.9e-77 258.2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
XP_057800697.1 Pfam PF17927 Ins134_P3_kin_N Domain 10 89 6.6e-28 97.7 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
XP_057800697.1 Pfam PF05770 Ins134_P3_kin Domain 112 309 6.9e-77 258.2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
XP_057800698.1 Pfam PF17927 Ins134_P3_kin_N Domain 10 89 6.6e-28 97.7 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
XP_057800698.1 Pfam PF05770 Ins134_P3_kin Domain 112 309 6.9e-77 258.2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

17 records

下载 cDNA FASTA
XM_057944697.1
TGAAATTAGCGGCCAAAAAAATAAGGGAAGAAACCCAAAATCGTTTGCCCTAATTATTCTACTTCTTCCGCAGCAGCAGCGCAGCGAAGCGAAGCGAACAATTCCAACTACGATACGATGTCAGAGGATTCTACGACGAGGTACCGTATAGGTTACGCTCTGGCGCCAAAGAAAGTTCAGAGTTTCATCCAACCATCGCTCCTCAATCTAGCCAAAGAGAGAGGAATCGATCTATTTCCTGTCCAAATCACCAAACCCTT...
XM_057944699.1
TGAAATTAGCGGCCAAAAAAATAAGGGAAGAAACCCAAAATCGTTTGCCCTAATTATTCTACTTCTTCCGCAGCAGCAGCGCAGCGAAGCGAAGCGAACAATTCCAACTACGATACGATGTCAGAGGATTCTACGACGAGGTACCGTATAGGTTACGCTCTGGCGCCAAAGAAAGTTCAGAGTTTCATCCAACCATCGCTCCTCAATCTAGCCAAAGAGAGAGGAATCGATCTATTTCCTGTCCAAATCACCAAACCCTT...

CDS

17 records

下载 CDS FASTA
LOC131016107
ATGTCAGAGGATTCTACGACGAGGTACCGTATAGGTTACGCTCTGGCGCCAAAGAAAGTTCAGAGTTTCATCCAACCATCGCTCCTCAATCTAGCCAAAGAGAGAGGAATCGATCTATTTCCTGTCCAAATCACCAAACCCTTGATCGATCAATTCCCCTTAAATTGTATCATCCACAAATTATCCGACCCGGAATGGCGGAATCAGCTCGAGCAGCTCCTCGTGCAGAAGCCAAACGTCGTCGTAATCGACCGGCCGGA...
LOC131016107
ATGTCAGAGGATTCTACGACGAGGTACCGTATAGGTTACGCTCTGGCGCCAAAGAAAGTTCAGAGTTTCATCCAACCATCGCTCCTCAATCTAGCCAAAGAGAGAGGAATCGATCTATTTCCTGTCCAAATCACCAAACCCTTGATCGATCAATTCCCCTTAAATTGTATCATCCACAAATTATCCGACCCGGAATGGCGGAATCAGCTCGAGCAGCTCCTCGTGCAGAAGCCAAACGTCGTCGTAATCGACCGGCCGGA...

Protein

17 records

下载 Protein FASTA
XP_057800680.1
MSEDSTTRYRIGYALAPKKVQSFIQPSLLNLAKERGIDLFPVQITKPLIDQFPLNCIIHKLSDPEWRNQLEQLLVQKPNVVVIDRPEAIERLHNRVSMLQAVNQLEIASGFSVGVPKQVSVENPQSLIECVASSGLSFPVIAKPLVANGTAGSHQMSLVFNEEGLRGLKLSQPFVLQEFVNHGAVIFKVYVAGQHIQCVKRRSLPDISEEKLGVLENSVSFSQISNVTAQDQSGDGVEKLMEAAELPPSSFVTKVASQLR...
XP_057800681.1
MSEDSTTRYRIGYALAPKKVQSFIQPSLLNLAKERGIDLFPVQITKPLIDQFPLNCIIHKLSDPEWRNQLEQLLVQKPNVVVIDRPEAIERLHNRVSMLQAVNQLEIASGFSVGVPKQVSVENPQSLIECVASSGLSFPVIAKPLVANGTAGSHQMSLVFNEEGLRGLKLSQPFVLQEFVNHGAVIFKVYVAGQHIQCVKRRSLPDISEEKLGVLENSVSFSQISNVTAQDQSGDGVEKLMEAAELPPSSFVTKVASQLR...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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