当前解析结果
SmilChr03G002957| 统一新 Gene ID | SmilChr03G002957 |
|---|---|
| 名称 | SmilChr03G002957 |
| 描述 | uncharacterized SmilChr03G002957 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 46312661 - 46314233 / - |
| NCBI Gene ID | LOC131016114 |
|---|---|
| GeneID | 131016114 |
| locus_tag | - |
| NCBI Name | LOC131016114 |
| 原始查询 | LOC131016114 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | rubredoxin family protein [Source:NCBI gene (formerly Entrezgene);Acc:831581]; symbol=ENH1; hit=AT5G17170; species=arabidopsis; confidence=high |
| 产物 | rubredoxin family protein [Source:NCBI gene (formerly Entrezgene);Acc:831581]; symbol=ENH1; hit=AT5G17170; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G17170 (ENH1)rubredoxin family protein [Source:NCBI gene (formerly Entrezgene);Acc:831581] identity=75; qcov=0.922; evalue=2.75e-125; confidence=high |
| Rice | Os08g0162600 (NP122)- identity=75.3; qcov=0.902; evalue=2.08e-119; confidence=high |
| GO | GO:0005506 (iron ion binding); GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131016114 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057800706.1 |
| 2 | Chloroplast thylakoid | 类囊体 | 1.00000 | XP_057800706.1 |
| 3 | Chloroplast thylakoid membrane | 类囊体膜 | 1.00000 | XP_057800706.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057800706.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057800706.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:46312841 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B27,B95,C59 |
Chr3:46312890 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A15 |
Chr3:46313196 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | B114 |
Chr3:46313196 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B114 |
Chr3:46313442 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C29 |
Chr3:46313472 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B47,B57,B78,C33,C60 |
Chr3:46313491 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B10 |
Chr3:46313850 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A14,B50,C33 |
Chr3:46313989 |
AAG |
A |
2bp_deletion | frameshift_variant | 7 | A10,A5,B18,B51,B90,C22,C69 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。