当前解析结果
SmilChr03G003075| 统一新 Gene ID | SmilChr03G003075 |
|---|---|
| 名称 | SmilChr03G003075 |
| 描述 | uncharacterized SmilChr03G003075 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 47777344 - 47779947 / - |
| NCBI Gene ID | LOC131016220 |
|---|---|
| GeneID | 131016220 |
| locus_tag | - |
| NCBI Name | LOC131016220 |
| 原始查询 | LOC131016220 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | non-structural protein [Source:NCBI gene (formerly Entrezgene);Acc:839560]; symbol=AT1G03180; hit=AT1G03180; species=arabidopsis; confidence=high |
| 产物 | non-structural protein [Source:NCBI gene (formerly Entrezgene);Acc:839560]; symbol=AT1G03180; hit=AT1G03180; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G03180 (AT1G03180)non-structural protein [Source:NCBI gene (formerly Entrezgene);Acc:839560] identity=53; qcov=0.989; evalue=3.2e-94; confidence=high |
| Rice | Os05g0251400 (OsBVF1)- identity=40.7; qcov=0.963; evalue=3.22e-65; confidence=medium |
| GO | GO:0005634 (nucleus); GO:0007096 (regulation of exit from mitosis) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131016220 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057800843.1 |
| 2 | Nucleus membrane | 核膜 | 0.20000 | XP_057800843.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057800843.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057800843.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057800843.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:47777719 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A4,B125,B140,B2,B85 |
Chr3:47779175 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B22,B23,C71 |
Chr3:47779547 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B106,B14,B19,C78 |
Chr3:47779551 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B97 |
Chr3:47779556 |
TG |
* |
1bp_deletion | CDS_variant | 5 | A8,B56,C11,C12,C65 |
Chr3:47779665 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | D10,D11 |
Chr3:47779723 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B51,C70 |
Chr3:47779737 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B110,B37,B38,C39,C78 |
Chr3:47779748 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B51,C70 |
Chr3:47779773 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B68,B88,C45 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。