当前解析结果
SmilChr03G003086| 统一新 Gene ID | SmilChr03G003086 |
|---|---|
| 名称 | SmilChr03G003086 |
| 描述 | uncharacterized SmilChr03G003086 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 47912099 - 47914074 / - |
| NCBI Gene ID | LOC131016229 |
|---|---|
| GeneID | 131016229 |
| locus_tag | - |
| NCBI Name | LOC131016229 |
| 原始查询 | LOC131016229 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | GRIP/coiled-coil protein [Source:NCBI gene (formerly Entrezgene);Acc:828171]; symbol=AT4G02800; hit=AT4G02800; species=arabidopsis; confidence=high |
| 产物 | GRIP/coiled-coil protein [Source:NCBI gene (formerly Entrezgene);Acc:828171]; symbol=AT4G02800; hit=AT4G02800; species=arabidopsis; confidence=high |
| Arabidopsis | AT4G02800 (AT4G02800)GRIP/coiled-coil protein [Source:NCBI gene (formerly Entrezgene);Acc:828171] identity=48.5; qcov=1.05; evalue=8.63e-97; confidence=high |
| Rice | Os04g0228100 (OSJNBa0065B15.1)- identity=47.3; qcov=0.988; evalue=6.98e-84; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131016229 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057800855.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057800855.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057800855.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057800855.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057800855.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:47912364 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A25,B20,B77,C9 |
Chr3:47912401 |
C |
CA |
1bp_insertion | frameshift_variant | 1 | B129 |
Chr3:47912401 |
C |
CA |
1bp_insertion | CDS_variant | 1 | B129 |
Chr3:47912583 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A25,B20,B77,C9 |
Chr3:47912609 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A25,B20,B77,C9 |
Chr3:47912922 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A11,B111,B17 |
Chr3:47912967 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A20,B63,B83,D11 |
Chr3:47912968 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A20,B63,B83,D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。