当前解析结果
SmilChr03G002240| 统一新 Gene ID | SmilChr03G002240 |
|---|---|
| 名称 | SmilChr03G002240 |
| 描述 | uncharacterized SmilChr03G002240 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 35288443 - 35289245 / - |
| NCBI Gene ID | LOC131016461 |
|---|---|
| GeneID | 131016461 |
| locus_tag | - |
| NCBI Name | LOC131016461 |
| 原始查询 | LOC131016461 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824338]; symbol=AT3G51750; hit=AT3G51750; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824338]; symbol=AT3G51750; hit=AT3G51750; species=arabidopsis; confidence=low |
| Arabidopsis | AT3G51750 (AT3G51750)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824338] identity=31.5; qcov=0.735; evalue=1.88e-06; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131016461 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057801139.1 |
| 2 | Cytosol | 细胞质基质 | 0.60000 | XP_057801139.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057801139.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057801139.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057801139.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:35288699 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A9,B82 |
Chr3:35288914 |
T |
TCC |
2bp_insertion | frameshift_variant | 142 | A1,A10,A19,A21,A23,A25,A3,A5,A6,A8,A9,B1,B100,B101,B102,B103,B106,B11,B110,B111,B112,B113,B118,B119,B122,B123,B125,B126,B127,B129,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B16,B17,B19,B2,B20,B21,B24,B29,B30,B32,B33,B35,B36,B37,B38,B39,B4,B41,B42,B43,B45,B46,B48,B5,B50,B51,B52,B54,B57,B59,B60,B61,B64,B65,B68,B69,B7,B70,B71,B72,B73,B77,B78,B8,B81,B82,B84,B85,B86,B90,B91,B92,B94,B95,B97,B98,C1,C12,C14,C15,C16,C17,C18,C20,C21,C23,C24,C28,C3,C30,C35,C37,C42,C45,C5,C50,C51,C54,C55,C58,C59,C6,C60,C61,C62,C65,C7,C70,C74,C75,C76,C80,C82,C84,C85,C9,D1,D11,D5,D6,D8,D9 |
Chr3:35289025 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A22,B117 |
Chr3:35289106 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B11,C58 |
Chr3:35289164 |
G |
GGA |
2bp_insertion | frameshift_variant | 29 | A14,A16,A20,A23,A25,A5,A7,B124,B128,B130,B136,B138,B15,B19,B26,B32,B35,B42,B43,B45,B63,B68,B80,B84,C46,C73,C84,D11,D2 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。