当前解析结果
SmilChr03G000064| 统一新 Gene ID | SmilChr03G000064 |
|---|---|
| 名称 | SmilChr03G000064 |
| 描述 | uncharacterized SmilChr03G000064 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 725468 - 727022 / - |
| NCBI Gene ID | LOC131016964 |
|---|---|
| GeneID | 131016964 |
| locus_tag | - |
| NCBI Name | LOC131016964 |
| 原始查询 | LOC131016964 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os08g0543000; species=rice; confidence=medium |
| 产物 | hit=Os08g0543000; species=rice; confidence=medium |
| Arabidopsis | AT2G40070 (AT2G40070)flocculation FLO11-like protein [Source:NCBI gene (formerly Entrezgene);Acc:818595] identity=46.4; qcov=0.577; evalue=1.86e-15; confidence=low |
| Rice | Os08g0543000- identity=41.6; qcov=0.887; evalue=1.63e-24; confidence=medium |
| GO | GO:0043622 (cortical microtubule organization); GO:0055028 (cortical microtubule) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131016964 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057801794.1 |
| 2 | Cytoplasm | 细胞质 | 1.00000 | XP_057801794.1 |
| 3 | Cytoplasmic granule | 细胞质颗粒 | 0.20000 | XP_057801794.1 |
| 4 | P-body | P-body | 0.20000 | XP_057801794.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057801794.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:726080 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B124,B134 |
Chr3:726153 |
TG |
T |
1bp_deletion | frameshift_variant | 19 | A7,B1,B103,B106,B108,B109,B111,B136,B138,B16,B23,B33,B68,B80,B82,B97,C3,C63,C67 |
Chr3:726183 |
TG |
T |
1bp_deletion | frameshift_variant | 1 | B131 |
Chr3:726183 |
TG |
T |
1bp_deletion | CDS_variant | 1 | B131 |
Chr3:726184 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B39,C66 |
Chr3:726187 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B25,B43,B9,C19,D11 |
Chr3:726195 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A16,B10,B31 |
Chr3:726223 |
A |
AT |
1bp_insertion | frameshift_variant | 1 | B133 |
Chr3:726223 |
A |
AT |
1bp_insertion | CDS_variant | 1 | B133 |
Chr3:726226 |
A |
AAC |
2bp_insertion | frameshift_variant | 22 | A18,A5,B1,B101,B106,B123,B28,B38,B39,B44,B47,B55,B62,B65,B66,B68,C14,C19,C43,C47,C53,C56 |
Chr3:726228 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D9 |
Chr3:726230 |
G |
A |
EMS_canonical_SNV | stop_gained | 3 | B128,B27,C38 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。