当前解析结果
SmilChr03G000588| 统一新 Gene ID | SmilChr03G000588 |
|---|---|
| 名称 | SmilChr03G000588 |
| 描述 | uncharacterized SmilChr03G000588 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 6535229 - 6537996 / - |
| NCBI Gene ID | LOC131017243 |
|---|---|
| GeneID | 131017243 |
| locus_tag | - |
| NCBI Name | LOC131017243 |
| 原始查询 | LOC131017243 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | cystic fibrosis transmembrane conductance regulator [Source:NCBI gene (formerly Entrezgene);Acc:840084]; symbol=AT1G31940; hit=AT1G31940; species=arabidopsis; confidence=medium |
| 产物 | cystic fibrosis transmembrane conductance regulator [Source:NCBI gene (formerly Entrezgene);Acc:840084]; symbol=AT1G31940; hit=AT1G31940; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G31940 (AT1G31940)cystic fibrosis transmembrane conductance regulator [Source:NCBI gene (formerly Entrezgene);Acc:840084] identity=59.4; qcov=0.975; evalue=1.63e-49; confidence=medium |
| Rice | Os02g0697700- identity=54.3; qcov=0.95; evalue=6.98e-46; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131017243 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057801970.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057801970.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057801970.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057801970.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057801970.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:6535803 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B111 |
Chr3:6535871 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A18,B3,B44,C86 |
Chr3:6535914 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C87 |
Chr3:6537035 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B78,D10 |
Chr3:6537660 |
GA |
G |
1bp_deletion | frameshift_variant | 1 | A18 |
Chr3:6537660 |
GA |
G |
1bp_deletion | CDS_variant | 1 | A18 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。