当前解析结果
SmilChr03G000777| 统一新 Gene ID | SmilChr03G000777 |
|---|---|
| 名称 | SmilChr03G000777 |
| 描述 | probable disease resistance protein At1g58602 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 8856531 - 8857283 / - |
| NCBI Gene ID | LOC131017395 |
|---|---|
| GeneID | 131017395 |
| locus_tag | - |
| NCBI Name | LOC131017395 |
| 原始查询 | LOC131017395 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | probable disease resistance protein At1g58602 |
| 产物 | probable disease resistance protein At1g58602 |
| Arabidopsis | AT5G35450 (AT5G35450)Disease resistance protein (CC-NBS-LRR class) family [Source:NCBI gene (formerly Entrezgene);Acc:833508] identity=41.9; qcov=0.594; evalue=7.7e-28; confidence=medium |
| Rice | Os10g0162846- identity=28.5; qcov=0.631; evalue=6.42e-12; confidence=low |
| GO | GO:0006457 (protein folding); GO:0043014 (alpha-tubulin binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131017395 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057802117.1 |
| 2 | Cytoplasm | 细胞质 | 0.60000 | XP_057802117.1 |
| 3 | Cytosol | 细胞质基质 | 0.40000 | XP_057802117.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057802117.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057802117.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:8856580 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B32,C11,C2,C21 |
Chr3:8856632 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B75,B95,C1 |
Chr3:8856636 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B75,B95,C1 |
Chr3:8856637 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B75,B95,C1 |
Chr3:8856682 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr3:8856692 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr3:8856796 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C37 |
Chr3:8856798 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B35,B75 |
Chr3:8856862 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C64 |
Chr3:8856866 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B67,C60 |
Chr3:8856870 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B66 |
Chr3:8856889 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B71,D2 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。