当前解析结果
SmilChr03G000579| 统一新 Gene ID | SmilChr03G000579 |
|---|---|
| 名称 | SmilChr03G000579 |
| 描述 | uncharacterized SmilChr03G000579 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 6422532 - 6425079 / + |
| NCBI Gene ID | LOC131018208 |
|---|---|
| GeneID | 131018208 |
| locus_tag | - |
| NCBI Name | LOC131018208 |
| 原始查询 | LOC131018208 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os06g0205337; species=rice; confidence=low |
| 产物 | hit=Os06g0205337; species=rice; confidence=low |
| Arabidopsis | AT1G43760 (AT1G43760)DNAse I-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:840968] identity=24.6; qcov=0.6; evalue=1.41e-11; confidence=weak |
| Rice | Os06g0205337- identity=27.4; qcov=0.52; evalue=2.31e-22; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018208 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 1.00000 | XP_057802915.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057802915.1 |
| 3 | Nucleus | 细胞核 | 0.40000 | XP_057802915.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057802915.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057802915.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:6422534 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A14 |
Chr3:6422549 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B33 |
Chr3:6422553 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B33 |
Chr3:6422563 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B13 |
Chr3:6422579 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B128,B33,C9 |
Chr3:6422597 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A1,A4,B16,B85,C18 |
Chr3:6422637 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B134,B16,B83,C15 |
Chr3:6422644 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A19,A7,B131,B20 |
Chr3:6422653 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | B13 |
Chr3:6422653 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B13 |
Chr3:6422671 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B71 |
Chr3:6422676 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。