当前解析结果
SmilChr03G000787| 统一新 Gene ID | SmilChr03G000787 |
|---|---|
| 名称 | SmilChr03G000787 |
| 描述 | uncharacterized SmilChr03G000787 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 8961464 - 8962555 / + |
| NCBI Gene ID | LOC131018267 |
|---|---|
| GeneID | 131018267 |
| locus_tag | - |
| NCBI Name | LOC131018267 |
| 原始查询 | LOC131018267 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os12g0292200; species=rice; confidence=weak |
| 产物 | hit=Os12g0292200; species=rice; confidence=weak |
| Arabidopsis | AT2G06105 (AT2G06105)aspartyl protease gag-polyprotein [Source:NCBI gene (formerly Entrezgene);Acc:28717693] identity=38.9; qcov=0.198; evalue=5.3e-10; confidence=weak |
| Rice | Os12g0292200- identity=45.3; qcov=0.262; evalue=4.02e-20; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018267 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057802972.1 |
| 2 | Nucleus | 细胞核 | 0.40000 | XP_057802972.1 |
| 3 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.40000 | XP_057802972.1 |
| 4 | Cytoplasmic granule | 细胞质颗粒 | 0.20000 | XP_057802972.1 |
| 5 | Cytosol | 细胞质基质 | 0.20000 | XP_057802972.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:8961466 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B35,B65,B75 |
Chr3:8961468 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B78 |
Chr3:8961472 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B78 |
Chr3:8961480 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B51 |
Chr3:8961489 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A4,C34 |
Chr3:8961538 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B1 |
Chr3:8961545 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B75,B83,C34,C49 |
Chr3:8961560 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B134,B35,B65,B75 |
Chr3:8961565 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B112,B55,C39 |
Chr3:8961625 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C1,C21,C85 |
Chr3:8961663 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr3:8961666 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B12 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。