当前解析结果
SmilChr03G001232| 统一新 Gene ID | SmilChr03G001232 |
|---|---|
| 名称 | SmilChr03G001232 |
| 描述 | uncharacterized SmilChr03G001232 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 14245787 - 14247148 / + |
| NCBI Gene ID | LOC131018414 |
|---|---|
| GeneID | 131018414 |
| locus_tag | - |
| NCBI Name | LOC131018414 |
| 原始查询 | LOC131018414 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | TRIO/F-actin-binding protein [Source:NCBI gene (formerly Entrezgene);Acc:818283]; symbol=AT2G37070; hit=AT2G37070; species=arabidopsis; confidence=low |
| 产物 | TRIO/F-actin-binding protein [Source:NCBI gene (formerly Entrezgene);Acc:818283]; symbol=AT2G37070; hit=AT2G37070; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G37070 (AT2G37070)TRIO/F-actin-binding protein [Source:NCBI gene (formerly Entrezgene);Acc:818283] identity=42.5; qcov=0.349; evalue=2.98e-07; confidence=low |
| Rice | Os05g0121800- identity=29.2; qcov=0.656; evalue=8.95e-07; confidence=low |
| GO | GO:0008017 (microtubule binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018414 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoskeleton | 细胞骨架 | 1.00000 | XP_057803121.1 |
| 2 | Nucleus | 细胞核 | 0.80000 | XP_057803121.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057803121.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057803121.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057803121.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:14246702 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr3:14246708 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C10 |
Chr3:14246974 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A6 |
Chr3:14247132 |
C |
CTT |
2bp_insertion | frameshift_variant | 3 | B135,B35,C48 |
Chr3:14247132 |
C |
CTT |
2bp_insertion | CDS_variant | 3 | B135,B35,C48 |
Chr3:14247133 |
AT |
A |
1bp_deletion | frameshift_variant | 55 | A16,A19,A20,A22,A4,A6,A8,B102,B107,B11,B111,B119,B122,B124,B133,B134,B136,B137,B26,B28,B3,B30,B32,B43,B44,B47,B61,B64,B82,B87,B9,B90,B92,B96,C12,C15,C20,C21,C24,C31,C4,C42,C44,C45,C47,C49,C59,C63,C69,C78,C8,C82,C86,D10,D7 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。