当前解析结果
SmilChr03G002020| 统一新 Gene ID | SmilChr03G002020 |
|---|---|
| 名称 | SmilChr03G002020 |
| 描述 | uncharacterized SmilChr03G002020 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 30224158 - 30226303 / - |
| NCBI Gene ID | LOC131018639 |
|---|---|
| GeneID | 131018639 |
| locus_tag | - |
| NCBI Name | LOC131018639 |
| 原始查询 | LOC131018639 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os12g0292200; species=rice; confidence=weak |
| 产物 | hit=Os12g0292200; species=rice; confidence=weak |
| Arabidopsis | -- |
| Rice | Os12g0292200- identity=28.4; qcov=0.149; evalue=1.53e-07; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018639 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057803337.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057803337.1 |
| 3 | Cytoplasmic granule | 细胞质颗粒 | 0.40000 | XP_057803337.1 |
| 4 | Cytosol | 细胞质基质 | 0.40000 | XP_057803337.1 |
| 5 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.20000 | XP_057803337.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:30224516 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B77 |
Chr3:30224615 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C77 |
Chr3:30224667 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B88 |
Chr3:30224668 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B3,B37,C43,C77 |
Chr3:30224830 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A2,B108,B123,B35,B46 |
Chr3:30224903 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B105,B41,C47,C80 |
Chr3:30225160 |
G |
A |
EMS_canonical_SNV | stop_gained | 3 | B120,B28,C32 |
Chr3:30225160 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B120,B28,C32 |
Chr3:30225199 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B18,C18,C24,C27,C3 |
Chr3:30225235 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C49 |
Chr3:30225239 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B52 |
Chr3:30225256 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B127 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。