当前解析结果
SmilChr03G002099| 统一新 Gene ID | SmilChr03G002099 |
|---|---|
| 名称 | SmilChr03G002099 |
| 描述 | uncharacterized SmilChr03G002099 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 32449626 - 32450876 / - |
| NCBI Gene ID | LOC131018664 |
|---|---|
| GeneID | 131018664 |
| locus_tag | - |
| NCBI Name | LOC131018664 |
| 原始查询 | LOC131018664 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os04g0590366; species=rice; confidence=low |
| 产物 | hit=Os04g0590366; species=rice; confidence=low |
| Arabidopsis | AT5G27260 (AT5G27260)Myb/SANT-like DNA-binding domain protein [Source:NCBI gene (formerly Entrezgene);Acc:832784] identity=23.1; qcov=0.997; evalue=2.38e-09; confidence=weak |
| Rice | Os04g0590366- identity=31.2; qcov=0.502; evalue=8.16e-20; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018664 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057803362.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057803362.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057803362.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057803362.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057803362.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:32449651 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C53 |
Chr3:32449652 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | B59 |
Chr3:32449652 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B59 |
Chr3:32449678 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr3:32449698 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B122,B40,C51,C52 |
Chr3:32449731 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C15 |
Chr3:32449739 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C48 |
Chr3:32449748 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A15,B98,C13,C20,C3 |
Chr3:32449765 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B135,B14,C60,C82,D1 |
Chr3:32449781 |
G |
A |
EMS_canonical_SNV | stop_gained | 4 | B129,B140,B85,B91 |
Chr3:32449781 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B129,B140,B85,B91 |
Chr3:32449805 |
G |
A |
EMS_canonical_SNV | stop_gained | 25 | A10,A15,A19,A3,B11,B111,B117,B119,B120,B123,B131,B139,B28,B30,B4,B48,B89,B99,C21,C32,C38,C68,D3,D5,D6 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。