当前解析结果
SmilChr03G002137| 统一新 Gene ID | SmilChr03G002137 |
|---|---|
| 名称 | SmilChr03G002137 |
| 描述 | mitotic checkpoint serine/threonine-protein kinase BUB1-like |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 33276009 - 33278964 / - |
| NCBI Gene ID | LOC131018676 |
|---|---|
| GeneID | 131018676 |
| locus_tag | - |
| NCBI Name | LOC131018676 |
| 原始查询 | LOC131018676 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | mitotic checkpoint serine/threonine-protein kinase BUB1-like |
| 产物 | mitotic checkpoint serine/threonine-protein kinase BUB1-like |
| Arabidopsis | AT2G20635 (AT2G20635)protein kinase and Mad3-BUB1-I domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:816591] identity=42.2; qcov=0.682; evalue=9.16e-30; confidence=medium |
| Rice | Os07g0508500 (BRK1)- identity=33.8; qcov=0.672; evalue=4.8e-22; confidence=low |
| GO | GO:0004672 (protein kinase activity); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation); GO:0007094 (mitotic spindle assembly checkpoint signaling); GO:0051754 (meiotic sister chromatid cohesion, centromeric) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018676 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057803373.1 |
| 2 | Cytoplasm | 细胞质 | 1.00000 | XP_057803373.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057803373.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057803373.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057803373.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:33277074 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B20,B5,B64 |
Chr3:33277443 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B69,C14,C57,C66 |
Chr3:33277451 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B132 |
Chr3:33277469 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A19,B71 |
Chr3:33277474 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B39 |
Chr3:33277479 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B115,B74 |
Chr3:33277495 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B102,B109,C82 |
Chr3:33277790 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B42,B43,C50 |
Chr3:33277803 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A15 |
Chr3:33277990 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B85 |
Chr3:33278055 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B42,C38 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。