当前解析结果
SmilChr03G002258| 统一新 Gene ID | SmilChr03G002258 |
|---|---|
| 名称 | SmilChr03G002258 |
| 描述 | uncharacterized SmilChr03G002258 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 35560831 - 35561946 / + |
| NCBI Gene ID | LOC131018712 |
|---|---|
| GeneID | 131018712 |
| locus_tag | - |
| NCBI Name | LOC131018712 |
| 原始查询 | LOC131018712 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| 产物 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G01050 (AT2G01050)zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629] identity=29.9; qcov=0.45; evalue=2.75e-20; confidence=low |
| Rice | Os09g0268800- identity=25.9; qcov=0.553; evalue=3.27e-08; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018712 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057803405.1 |
| 2 | Cytosol | 细胞质基质 | 0.40000 | XP_057803405.1 |
| 3 | Cytoplasmic granule | 细胞质颗粒 | 0.20000 | XP_057803405.1 |
| 4 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.20000 | XP_057803405.1 |
| 5 | P-body | P-body | 0.20000 | XP_057803405.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:35561028 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr3:35561062 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B8 |
Chr3:35561096 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr3:35561319 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B41 |
Chr3:35561331 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B32,B85,B94,C25 |
Chr3:35561375 |
G |
A |
EMS_canonical_SNV | stop_gained | 4 | B33,B49,C32,C68 |
Chr3:35561375 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B33,B49,C32,C68 |
Chr3:35561388 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B74,C45,C8,D3 |
Chr3:35561395 |
C |
T |
EMS_canonical_SNV | stop_gained | 14 | B117,B132,B64,B65,B8,B91,C23,C3,C31,C6,C65,C7,C70,C80 |
Chr3:35561405 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B41 |
Chr3:35561406 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B94,C5 |
Chr3:35561416 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A22,B108,B110,C73,D6 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。