当前解析结果
SmilChr03G002300| 统一新 Gene ID | SmilChr03G002300 |
|---|---|
| 名称 | SmilChr03G002300 |
| 描述 | uncharacterized SmilChr03G002300 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 36218470 - 36218878 / + |
| NCBI Gene ID | LOC131018726 |
|---|---|
| GeneID | 131018726 |
| locus_tag | - |
| NCBI Name | LOC131018726 |
| 原始查询 | LOC131018726 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | transmembrane protein, putative (Protein of unknown function, DUF538) [Source:NCBI gene (formerly Entrezgene);Acc:819935]; symbol=AT3G07470; hit=AT3G07470; species=arabidopsis; confidence=low |
| 产物 | transmembrane protein, putative (Protein of unknown function, DUF538) [Source:NCBI gene (formerly Entrezgene);Acc:819935]; symbol=AT3G07470; hit=AT3G07470; species=arabidopsis; confidence=low |
| Arabidopsis | AT3G07470 (AT3G07470)transmembrane protein, putative (Protein of unknown function, DUF538) [Source:NCBI gene (formerly Entrezgene);Acc:819935] identity=40; qcov=1.03; evalue=4.26e-18; confidence=low |
| Rice | Os01g0913100- identity=32.5; qcov=1.02; evalue=5.25e-13; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018726 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.60000 | XP_057803417.1 |
| 2 | Endoplasmic reticulum | 内质网 | 0.40000 | XP_057803417.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057803417.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057803417.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057803417.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:36218486 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B133,B57,B7,B72,C62 |
Chr3:36218490 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B128,C20,C24 |
Chr3:36218501 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr3:36218544 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B53,B97,C14,C20 |
Chr3:36218568 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B89 |
Chr3:36218576 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B104,B128,C20,C24 |
Chr3:36218616 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B117,B126,B26,D4 |
Chr3:36218726 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | B59 |
Chr3:36218726 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B59 |
Chr3:36218729 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr3:36218738 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B122 |
Chr3:36218739 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A11,A3,B59,C4,C41 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。