当前解析结果
SmilChr01G001608| 统一新 Gene ID | SmilChr01G001608 |
|---|---|
| 名称 | SmilChr01G001608 |
| 描述 | uncharacterized SmilChr01G001608 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 30242182 - 30250484 / + |
| NCBI Gene ID | LOC131018971 |
|---|---|
| GeneID | 131018971 |
| locus_tag | - |
| NCBI Name | LOC131018971 |
| 原始查询 | LOC131018971 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os01g0967100; species=rice; confidence=low |
| 产物 | hit=Os01g0967100; species=rice; confidence=low |
| Arabidopsis | AT5G22450 (AT5G22450)spectrin beta chain, brain [Source:NCBI gene (formerly Entrezgene);Acc:832306] identity=33.3; qcov=1; evalue=7.62e-148; confidence=low |
| Rice | Os01g0967100- identity=34.9; qcov=1.03; evalue=2.45e-162; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018971 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057803641.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057803641.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057803641.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057803641.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057803641.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:30243398 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr1:30243408 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr1:30243568 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr1:30244145 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B139 |
Chr1:30245065 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B104,D9 |
Chr1:30245221 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B104,D9 |
Chr1:30245300 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A4,B13,B139,C21 |
Chr1:30245313 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A14,B65,B8,D6 |
Chr1:30245530 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr1:30245614 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B62,B66,C26,C35,C45 |
Chr1:30245940 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B123,B30,C56 |
Chr1:30245957 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B38 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。