当前解析结果
SmilChr01G001617| 统一新 Gene ID | SmilChr01G001617 |
|---|---|
| 名称 | SmilChr01G001617 |
| 描述 | uncharacterized SmilChr01G001617 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 30283607 - 30286909 / - |
| NCBI Gene ID | LOC131019049 |
|---|---|
| GeneID | 131019049 |
| locus_tag | - |
| NCBI Name | LOC131019049 |
| 原始查询 | LOC131019049 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | SET domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:824824]; symbol=AT3G56570; hit=AT3G56570; species=arabidopsis; confidence=high |
| 产物 | SET domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:824824]; symbol=AT3G56570; hit=AT3G56570; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G56570 (AT3G56570)SET domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:824824] identity=48.5; qcov=1.06; evalue=5.31e-158; confidence=high |
| Rice | Os01g0879500- identity=46; qcov=1; evalue=7.63e-141; confidence=high |
| GO | GO:0005634 (nucleus); GO:0016279 (protein-lysine N-methyltransferase activity); GO:0018026 (peptidyl-lysine monomethylation) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131019049 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057803716.1 |
| 2 | Cytoplasm | 细胞质 | 0.40000 | XP_057803716.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057803716.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057803716.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057803716.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:30283827 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A13,B29,B35,C48 |
Chr1:30283839 |
CT |
C |
1bp_deletion | frameshift_variant | 4 | B136,C11,C69,D11 |
Chr1:30283839 |
CT |
C |
1bp_deletion | CDS_variant | 4 | B136,C11,C69,D11 |
Chr1:30284024 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B82 |
Chr1:30284039 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D9 |
Chr1:30284082 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A13,B29,B35,C48 |
Chr1:30284123 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C2 |
Chr1:30284163 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C5 |
Chr1:30284226 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A13,B29,B35,C48 |
Chr1:30284404 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C25,C74 |
Chr1:30284655 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B139 |
Chr1:30284741 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B13,B56,B96 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。