当前解析结果
SmilChr04G001675| 统一新 Gene ID | SmilChr04G001675 |
|---|---|
| 名称 | SmilChr04G001675 |
| 描述 | uncharacterized SmilChr04G001675 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 27769812 - 27776766 / + |
| NCBI Gene ID | LOC131019551 |
|---|---|
| GeneID | 131019551 |
| locus_tag | - |
| NCBI Name | LOC131019551 |
| 原始查询 | LOC131019551 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Homeodomain-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:842765]; symbol=DUO3; hit=AT1G64570; species=arabidopsis; confidence=medium |
| 产物 | Homeodomain-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:842765]; symbol=DUO3; hit=AT1G64570; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G64570 (DUO3)Homeodomain-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:842765] identity=38.9; qcov=0.556; evalue=1.23e-132; confidence=medium |
| Rice | -- |
| GO | GO:0003712 (transcription coregulator activity); GO:0005634 (nucleus); GO:0006355 (regulation of DNA-templated transcription) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131019551 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057804100.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057804100.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057804100.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057804100.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057804100.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:27771083 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A8,B40,B65,B88 |
Chr4:27772205 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A16,B91,C70 |
Chr4:27772316 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A13,B34,C13,C76,D1 |
Chr4:27775977 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A5,C10 |
Chr4:27776517 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D1 |
Chr4:27776521 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A5,B122,B44,B66,C53 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。