当前解析结果
SmilChr04G001698| 统一新 Gene ID | SmilChr04G001698 |
|---|---|
| 名称 | SmilChr04G001698 |
| 描述 | uncharacterized SmilChr04G001698 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 28075650 - 28080607 / + |
| NCBI Gene ID | LOC131019583 |
|---|---|
| GeneID | 131019583 |
| locus_tag | - |
| NCBI Name | LOC131019583 |
| 原始查询 | LOC131019583 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | DHHA1 domain protein [Source:NCBI gene (formerly Entrezgene);Acc:841770]; symbol=AT1G53345; hit=AT1G53345; species=arabidopsis; confidence=high |
| 产物 | DHHA1 domain protein [Source:NCBI gene (formerly Entrezgene);Acc:841770]; symbol=AT1G53345; hit=AT1G53345; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G53345 (AT1G53345)DHHA1 domain protein [Source:NCBI gene (formerly Entrezgene);Acc:841770] identity=58.4; qcov=0.856; evalue=1.93e-90; confidence=high |
| Rice | Os11g0167200- identity=33.2; qcov=0.904; evalue=1.39e-34; confidence=low |
| GO | GO:0005524 (ATP binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131019583 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 1.00000 | XP_057804137.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057804137.1 |
| 3 | Nucleus | 细胞核 | 0.20000 | XP_057804137.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057804137.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057804137.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:28075774 |
T |
TA |
1bp_insertion | stop_gained,frameshift_variant | 2 | A3,C2 |
Chr4:28075774 |
T |
TA |
1bp_insertion | CDS_variant | 2 | A3,C2 |
Chr4:28076462 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B118,B122,C37 |
Chr4:28077766 |
AT |
A |
1bp_deletion | frameshift_variant | 4 | B115,B53,C42,C84 |
Chr4:28077766 |
AT |
A |
1bp_deletion | CDS_variant | 4 | B115,B53,C42,C84 |
Chr4:28077788 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B17,B27,C43,C45,C79 |
Chr4:28080199 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C59,C84 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。