当前解析结果
SmilChr04G001850| 统一新 Gene ID | SmilChr04G001850 |
|---|---|
| 名称 | SmilChr04G001850 |
| 描述 | uncharacterized SmilChr04G001850 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 30172480 - 30175004 / + |
| NCBI Gene ID | LOC131019713 |
|---|---|
| GeneID | 131019713 |
| locus_tag | - |
| NCBI Name | LOC131019713 |
| 原始查询 | LOC131019713 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:836430]; symbol=AT5G63100; hit=AT5G63100; species=arabidopsis; confidence=high |
| 产物 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:836430]; symbol=AT5G63100; hit=AT5G63100; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G63100 (AT5G63100)S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:836430] identity=63.8; qcov=0.881; evalue=9.58e-116; confidence=high |
| Rice | Os02g0489500- identity=47.1; qcov=0.863; evalue=3.07e-74; confidence=high |
| GO | GO:0006596 (polyamine biosynthetic process); GO:0010487 (thermospermine synthase activity) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131019713 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057804287.1 |
| 2 | Chloroplast stroma | 叶绿体基质 | 1.00000 | XP_057804287.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057804287.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057804287.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057804287.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:30172719 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B34,B59,C42,C7,D1 |
Chr4:30172737 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C30,C49 |
Chr4:30172812 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B47 |
Chr4:30172980 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A13,C13 |
Chr4:30173149 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr4:30173190 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B136,C24 |
Chr4:30173295 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B33 |
Chr4:30173379 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A20,C54 |
Chr4:30173517 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B104,B12,D10,D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。