当前解析结果
SmilChr04G001081| 统一新 Gene ID | SmilChr04G001081 |
|---|---|
| 名称 | SmilChr04G001081 |
| 描述 | uncharacterized SmilChr04G001081 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 15487414 - 15489406 / + |
| NCBI Gene ID | LOC131019804 |
|---|---|
| GeneID | 131019804 |
| locus_tag | - |
| NCBI Name | LOC131019804 |
| 原始查询 | LOC131019804 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | serine/arginine repetitive matrix-like protein [Source:NCBI gene (formerly Entrezgene);Acc:820014]; symbol=AT3G08670; hit=AT3G08670; species=arabidopsis; confidence=high |
| 产物 | serine/arginine repetitive matrix-like protein [Source:NCBI gene (formerly Entrezgene);Acc:820014]; symbol=AT3G08670; hit=AT3G08670; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G08670 (AT3G08670)serine/arginine repetitive matrix-like protein [Source:NCBI gene (formerly Entrezgene);Acc:820014] identity=56.5; qcov=0.928; evalue=1.19e-113; confidence=high |
| Rice | Os05g0480600- identity=38.1; qcov=1.17; evalue=1.17e-66; confidence=medium |
| GO | GO:0043622 (cortical microtubule organization); GO:0055028 (cortical microtubule) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131019804 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoskeleton | 细胞骨架 | 1.00000 | XP_057804378.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057804378.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057804378.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057804378.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057804378.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:15487650 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A13,C13 |
Chr4:15487972 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B111,B55 |
Chr4:15487990 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B111,B55,C72 |
Chr4:15487997 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C18 |
Chr4:15488020 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C18 |
Chr4:15488130 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C18,C2,C35 |
Chr4:15488275 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C18,C2 |
Chr4:15488308 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A13,C13 |
Chr4:15488331 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C2,C35 |
Chr4:15488350 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C18,C2,C35 |
Chr4:15488355 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C18,C2,C35 |
Chr4:15488392 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C18,C2 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。