当前解析结果
SmilChr04G003321| 统一新 Gene ID | SmilChr04G003321 |
|---|---|
| 名称 | SmilChr04G003321 |
| 描述 | uncharacterized SmilChr04G003321 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 49956768 - 49958289 / + |
| NCBI Gene ID | LOC131020219 |
|---|---|
| GeneID | 131020219 |
| locus_tag | - |
| NCBI Name | LOC131020219 |
| 原始查询 | LOC131020219 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | B-cell receptor-associated 31-like protein [Source:NCBI gene (formerly Entrezgene);Acc:841265]; symbol=AT1G48440; hit=AT1G48440; species=arabidopsis; confidence=high |
| 产物 | B-cell receptor-associated 31-like protein [Source:NCBI gene (formerly Entrezgene);Acc:841265]; symbol=AT1G48440; hit=AT1G48440; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G48440 (AT1G48440)B-cell receptor-associated 31-like protein [Source:NCBI gene (formerly Entrezgene);Acc:841265] identity=64.3; qcov=1; evalue=1.07e-61; confidence=high |
| Rice | Os03g0240700- identity=68.2; qcov=1; evalue=2.22e-59; confidence=high |
| GO | GO:0005783 (endoplasmic reticulum); GO:0005789 (endoplasmic reticulum membrane); GO:0006886 (intracellular protein transport); GO:0006888 (endoplasmic reticulum to Golgi vesicle-mediated transport); GO:0070973 (protein localization to endoplasmic reticulum exit site) |
| KEGG | - |
| Pfam | PF05529 (Bap31) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131020219 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Vesicle | 囊泡 | 1.00000 | XP_057804898.1 |
| 2 | Cytoplasmic vesicle | 细胞质囊泡 | 0.60000 | XP_057804898.1 |
| 3 | Secretory vesicle | Secretory vesicle | 0.60000 | XP_057804898.1 |
| 4 | Golgi apparatus | 高尔基体 | 0.60000 | XP_057804898.1 |
| 5 | Endoplasmic reticulum | 内质网 | 0.40000 | XP_057804898.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:49957232 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B100 |
Chr4:49957906 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B102,B132,B3,B61 |
Chr4:49958067 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C62,C65 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057804898.1PF05529
Bap31 1-120 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057804898.1 |
Pfam | PF05529 |
Bap31 | Family | 1 | 120 | 1.2e-07 | 32.4 | Bap31/Bap29 transmembrane region |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。