Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G003395`

染色体: Chr04 坐标: 50492490-50499417 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G003395`
名称	SmilChr04G003395
描述	enolase 1, chloroplastic
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	50492490 - 50499417 / `-`

ID 对照

NCBI Gene ID	`LOC131020292`
GeneID	`131020292`
locus_tag	`-`
NCBI Name	`LOC131020292`
原始查询	`LOC131020292`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	enolase 1, chloroplastic
产物	enolase 1%2C chloroplastic
Arabidopsis	`AT1G74030` (ENO1) enolase 1 [Source:NCBI gene (formerly Entrezgene);Acc:843741] identity=82.5; qcov=1.01; evalue=0; confidence=high
Rice	`Os09g0375000` (OsEno1) - identity=84.8; qcov=0.945; evalue=0; confidence=high
GO	GO:0000015 (phosphopyruvate hydratase complex); GO:0000287 (magnesium ion binding); GO:0004634 (phosphopyruvate hydratase activity); GO:0006096 (glycolytic process)
KEGG	smil00010 (Glycolysis / Gluconeogenesis - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)); smil01200 (Carbon metabolism - Salvia miltiorrhiza (redroot sage)); smil01230 (Biosynthesis of amino acids - Salvia miltiorrhiza (redroot sage)); smil03018 (RNA degradation - Salvia miltiorrhiza (redroot sage)); smil04820 (Cytoskeleton in muscle cells - Salvia miltiorrhiza (redroot sage))
Pfam	PF00113 (Enolase_C); PF03952 (Enolase_N); PF13378 (MR_MLE_C)
InterPro	-
eggNOG	-
NR	GeneID:131020292

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057805000.1`
2	Chloroplast stroma	叶绿体基质	1.00000	`XP_057805000.1`
3	Nucleus	细胞核	0.00000	`XP_057805000.1`
4	Chromosome	染色体	0.00000	`XP_057805000.1`
5	Centromere	着丝粒	0.00000	`XP_057805000.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr4:50492931`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B100,C32,C68
`Chr4:50493181`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C71
`Chr4:50493226`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B140,B99,C8
`Chr4:50493235`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D7
`Chr4:50493259`	`C`	`T`	EMS_canonical_SNV	stop_gained	3	B113,B6,C67
`Chr4:50493259`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B113,B6,C67
`Chr4:50493263`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B26,C6
`Chr4:50493307`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C71
`Chr4:50495530`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B104,B26,C6
`Chr4:50495756`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B5,B78,B79
`Chr4:50497615`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B67
`Chr4:50497720`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C6

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057805000.1

487 aa

244

487

Enolase_N

Enolase_C

MR_MLE_C

PF03952 Enolase_N 59-189 aa PF00113 Enolase_C 198-485 aa PF13378 MR_MLE_C 340-448 aa

XP_057805001.1

487 aa

244

487

Enolase_N

Enolase_C

MR_MLE_C

PF03952 Enolase_N 59-189 aa PF00113 Enolase_C 198-485 aa PF13378 MR_MLE_C 340-448 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057805000.1`	Pfam	`PF03952`	Enolase_N	Domain	59	189	2e-55	187.2	Enolase, N-terminal domain
`XP_057805000.1`	Pfam	`PF00113`	Enolase_C	Domain	198	485	9.7e-148	492.0	Enolase, C-terminal TIM barrel domain
`XP_057805000.1`	Pfam	`PF13378`	MR_MLE_C	Domain	340	448	1.8e-07	31.8	Enolase C-terminal domain-like
`XP_057805001.1`	Pfam	`PF03952`	Enolase_N	Domain	59	189	2e-55	187.2	Enolase, N-terminal domain
`XP_057805001.1`	Pfam	`PF00113`	Enolase_C	Domain	198	485	9.7e-148	492.0	Enolase, C-terminal TIM barrel domain
`XP_057805001.1`	Pfam	`PF13378`	MR_MLE_C	Domain	340	448	1.8e-07	31.8	Enolase C-terminal domain-like

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XR_009100660.1
CGAGAGAGTGAGCATGAGGGAGGATCTGATCTACCTACTCCCTAATTCCTAACGTCCAACAACCAGCAAAAGCCACCTCTCTCATCTCTACCTCTTCGCCCCCTCCACTCGACGGACTTTCCCATATAAACCCCCCTTCCTTTATATTTGTGATTGTCACCCCCACCCCCACCCCCTCCCCCTCCCCCTCACATCTCCACCAATACAATGGCTTTGACTCCCTCTCACCTCTCCAAGCCCATCTTCTCCACCAAGCCCAC...

XM_057949017.1
CGAGAGAGTGAGCATGAGGGAGGATCTGATCTACCTACTCCCTAATTCCTAACGTCCAACAACCAGCAAAAGCCACCTCTCTCATCTCTACCTCTTCGCCCCCTCCACTCGACGGACTTTCCCATATAAACCCCCCTTCCTTTATATTTGTGATTGTCACCCCCACCCCCACCCCCTCCCCCTCCCCCTCACATCTCCACCAATACAATGGCTTTGACTCCCTCTCACCTCTCCAAGCCCATCTTCTCCACCAAGCCCAC...

CDS

2 records

下载 CDS FASTA

LOC131020292
ATGGCTTTGACTCCCTCTCACCTCTCCAAGCCCATCTTCTCCACCAAGCCCACTTCCCAAACGCCTCTCTTCTCACTCCCCTCCACGCACCGGATCAAATCTTCTCCCTTCTCCGTGCGCAGCTCCGTCGCCGCCGCCCCTTCCCCCACCCTCGCCGCCAAGGCCTCCAACAAGGTCAAGCACGTCAAGGCGCGCCAGATCGTCGACAGCAGGGGCAACCCCACCGTCGAGGTTGATCTCATCACCGAGGATGACTCGCT...

Protein

2 records

下载 Protein FASTA

XP_057805000.1
MALTPSHLSKPIFSTKPTSQTPLFSLPSTHRIKSSPFSVRSSVAAAPSPTLAAKASNKVKHVKARQIVDSRGNPTVEVDLITEDDSLYRSAVPSGASTGIYEALELRDGDKAVYGGKGVLNAVLNINQFLGPKLVGIDVRNQTDVDAVMLEIDGTPNKSKLGANAILGVSLSVCRAGAGAKGVPLYKHIQEISNTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGASSFSEAFRMGSEVYHILKGIIKAKYGQDAC...

XP_057805001.1
MALTPSHLSKPIFSTKPTSQTPLFSLPSTHRIKSSPFSVRSSVAAAPSPTLAAKASNKVKHVKARQIVDSRGNPTVEVDLITEDDSLYRSAVPSGASTGIYEALELRDGDKAVYGGKGVLNAVLNINQFLGPKLVGIDVRNQTDVDAVMLEIDGTPNKSKLGANAILGVSLSVCRAGAGAKGVPLYKHIQEISNTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGASSFSEAFRMGSEVYHILKGIIKAKYGQDAC...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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