Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G003442`

染色体: Chr04 坐标: 50938830-50942826 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G003442`
名称	SmilChr04G003442
描述	uncharacterized SmilChr04G003442
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	50938830 - 50942826 / `-`

ID 对照

NCBI Gene ID	`LOC131020336`
GeneID	`131020336`
locus_tag	`-`
NCBI Name	`LOC131020336`
原始查询	`LOC131020336`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	myosin heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:830682]; symbol=AT5G07890; hit=AT5G07890; species=arabidopsis; confidence=medium
产物	myosin heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:830682]; symbol=AT5G07890; hit=AT5G07890; species=arabidopsis; confidence=medium
Arabidopsis	`AT5G07890` (AT5G07890) myosin heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:830682] identity=44.4; qcov=1.02; evalue=1.93e-75; confidence=medium
Rice	`Os07g0598700` - identity=38.8; qcov=0.908; evalue=1.79e-52; confidence=medium
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131020336

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	0.60000	`XP_057805062.1`
2	Cytoskeleton	细胞骨架	0.40000	`XP_057805061.1`
3	Cytosol	细胞质基质	0.40000	`XP_057805065.1`
4	Nucleus	细胞核	0.20000	`XP_057805062.1`
5	Phragmoplast	Phragmoplast	0.20000	`XP_057805066.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr4:50939409`	`G`	`A`	EMS_canonical_SNV	stop_gained	4	B125,B90,B92,C87
`Chr4:50939409`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B125,B90,B92,C87
`Chr4:50940203`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B35
`Chr4:50940216`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B94
`Chr4:50940310`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B109,B112,B119,B121,B26
`Chr4:50940313`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B108,B9,C15,C51,C77
`Chr4:50940327`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B50,B6,C29,C37,C63
`Chr4:50940373`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B35
`Chr4:50940582`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B35
`Chr4:50941047`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B108
`Chr4:50941098`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

9 records

下载 cDNA FASTA

XM_057949079.1
GAAATTCCACAACTATTCCAATTTTCAAATTATAGCTCGACAATCATCGCATCCGGCAATTCCTCACTGTCAAGCCAACATAATCAAATTCTTCGAAGAAATAAGTCAAAAACGGGAGGAAAAACAAAGCAATAAATTCACAATTCCATCTGTTGAAGCTCGCAGATTTATATCTGAAGCCCTAGTACCAATGTCTAGTGGTTTAAGTGGGGGTAGTGATGGTTCTTTTGATGCTGATGACTTGTCGAAGATCAGGGAAC...

XM_057949080.1
GAAATTCCACAACTATTCCAATTTTCAAATTATAGCTCGACAATCATCGCATCCGGCAATTCCTCACTGTCAAGCCAACATAATCAAATTCTTCGAAGAAATAAGTCAAAAACGGGAGGAAAAACAAAGCAATAAATTCACAATTCCATCTGTTGAAGCTCGCAGATTTATATCTGAAGCCCTAGTACCAGTAATTCCTCTGAAGAACTAATGTCTAGTGGTTTAAGTGGGGGTAGTGATGGTTCTTTTGATGCTGATGA...

CDS

9 records

下载 CDS FASTA

LOC131020336
ATGATGTCTAGTGGTTTAAGTGGGGGTAGTGATGGTTCTTTTGATGCTGATGACTTGTCGAAGATCAGGGAACGATTTAAGGAGAGATTGGAATTCCATGTTAAAACATTGTCTGAATCCCGCGAAGGAGACAAGATGCGCATAACAGATTTGGAAAGAGAACTCAGTAATTGCATCCAAGAAATAGATTACCTGCAGGATCAACTGAGCGTGAGGAACTCAAGCCTTAACTATCCTGGCGAGCAAGTATGTAGCTGTCG...

LOC131020336
ATGATGTCTAGTGGTTTAAGTGGGGGTAGTGATGGTTCTTTTGATGCTGATGACTTGTCGAAGATCAGGGAACGATTTAAGGAGCTTACAAAGGAAAAGGAGATGCTCAGAGATTCTAAGTCCCAGGGGTTTGAGCTACTCAGGAGATTGGAATTCCATGTTAAAACATTGTCTGAATCCCGCGAAGGAGACAAGATGCGCATAACAGATTTGGAAAGAGAACTCAGTAATTGCATCCAAGAAATAGATTACCTGCAGGA...

Protein

9 records

下载 Protein FASTA

XP_057805061.1
MMSSGLSGGSDGSFDADDLSKIRERFKELTKEKEMLRDSKSQGFELLRRLEFHVKTLSESREGDKMRITDLERELSNCIQEIDYLQDQLSVRNSSLNYPGEQVCSCRFKLADMEDLEEEVGRLREQIKISEFERLLLMQEVEDKEEAIRCSASRIENLEESISSMALEYQCEIESIKLDASTLEQNLFKTKKFLEEKTRENSTVNGLIEDLETRNQDAYKVIERLRKENKDLTEKLQFSDLSITTFVKDVEEQLHDWLAK...

XP_057805062.1
MSSGLSGGSDGSFDADDLSKIRERFKELTKEKEMLRDSKSQGFELLRRLEFHVKTLSESREGDKMRITDLERELSNCIQEIDYLQDQLSVRNSSLNYPGEQVCSCRFKLADMEDLEEEVGRLREQIKISEFERLLLMQEVEDKEEAIRCSASRIENLEESISSMALEYQCEIESIKLDASTLEQNLFKTKKFLEEKTRENSTVNGLIEDLETRNQDAYKVIERLRKENKDLTEKLQFSDLSITTFVKDVEEQLHDWLAKI...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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