当前解析结果
SmilChr04G003499| 统一新 Gene ID | SmilChr04G003499 |
|---|---|
| 名称 | SmilChr04G003499 |
| 描述 | uncharacterized SmilChr04G003499 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 51410634 - 51412683 / + |
| NCBI Gene ID | LOC131020391 |
|---|---|
| GeneID | 131020391 |
| locus_tag | - |
| NCBI Name | LOC131020391 |
| 原始查询 | LOC131020391 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3768859]; symbol=MUG7; hit=AT3G05850; species=arabidopsis; confidence=low |
| 产物 | MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3768859]; symbol=MUG7; hit=AT3G05850; species=arabidopsis; confidence=low |
| Arabidopsis | AT3G05850 (MUG7)MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3768859] identity=25.8; qcov=0.958; evalue=4.99e-56; confidence=low |
| Rice | Os12g0597300- identity=26.6; qcov=0.948; evalue=5.76e-56; confidence=low |
| GO | GO:0008270 (zinc ion binding) |
| KEGG | - |
| Pfam | PF00872 (Transposase_mut); PF04434 (SWIM); PF10551 (MULE) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131020391 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057805142.1 |
| 2 | Cytoplasm | 细胞质 | 0.20000 | XP_057805142.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057805142.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057805142.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057805142.1 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057805142.1PF00872
Transposase_mut 174-274 aa
PF10551
MULE 175-269 aa
PF04434
SWIM 418-448 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057805142.1 |
Pfam | PF00872 |
Transposase_mut | Family | 174 | 274 | 1e-10 | 41.8 | Transposase, Mutator family |
XP_057805142.1 |
Pfam | PF10551 |
MULE | Domain | 175 | 269 | 2.2e-20 | 73.5 | MULE transposase domain |
XP_057805142.1 |
Pfam | PF04434 |
SWIM | Domain | 418 | 448 | 2.4e-07 | 30.9 | SWIM zinc finger |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。