Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G003910`

染色体: Chr04 坐标: 54840407-54844616 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G003910`
名称	SmilChr04G003910
描述	BTB/POZ domain-containing protein POB1-like
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	54840407 - 54844616 / `+`

ID 对照

NCBI Gene ID	`LOC131020772`
GeneID	`131020772`
locus_tag	`-`
NCBI Name	`LOC131020772`
原始查询	`LOC131020772`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	BTB/POZ domain-containing protein POB1-like
产物	BTB/POZ domain-containing protein POB1-like
Arabidopsis	`AT3G61600` (POB1) POZ/BTB containin G-protein 1 [Source:NCBI gene (formerly Entrezgene);Acc:825333] identity=74.9; qcov=0.995; evalue=0; confidence=high
Rice	`Os06g0507400` - identity=64.9; qcov=0.961; evalue=0; confidence=high
GO	GO:0005515 (protein binding); GO:0005634 (nucleus); GO:0010114 (response to red light)
KEGG	-
Pfam	PF00651 (BTB); PF07707 (BACK); PF21536 (BTB_KLHL33)
InterPro	-
eggNOG	-
NR	GeneID:131020772

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057805764.1`
2	Cytosol	细胞质基质	0.40000	`XP_057805764.1`
3	Cytoplasm	细胞质	0.20000	`XP_057805764.1`
4	Chromosome	染色体	0.00000	`XP_057805764.1`
5	Centromere	着丝粒	0.00000	`XP_057805764.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr4:54841611`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr4:54841621`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B35
`Chr4:54842998`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B46,D11
`Chr4:54843049`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B123,B29,B99
`Chr4:54843148`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C64,C66
`Chr4:54843150`	`C`	`CT`	1bp_insertion	stop_gained,frameshift_variant	21	B103,B119,B124,B126,B132,B136,B38,B39,B53,B56,B7,B77,B9,B96,B99,C14,C19,C22,C41,C44,C69
`Chr4:54843152`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B76
`Chr4:54843164`	`C`	`T`	EMS_canonical_SNV	stop_gained	1	B59
`Chr4:54843164`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B59
`Chr4:54843177`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B40
`Chr4:54843556`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B9,C35
`Chr4:54843572`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C82

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057805764.1

567 aa

284

567

BTB

BTB_KLHL33

BACK

PF00651 BTB 158-246 aa PF21536 BTB_KLHL33 177-241 aa PF07707 BACK 272-364 aa

XP_057805766.1

560 aa

280

560

BTB

BTB_KLHL33

BACK

PF00651 BTB 151-239 aa PF21536 BTB_KLHL33 170-234 aa PF07707 BACK 265-357 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057805764.1`	Pfam	`PF00651`	BTB	Domain	158	246	8.2e-14	52.4	BTB/POZ domain
`XP_057805764.1`	Pfam	`PF21536`	BTB_KLHL33	Domain	177	241	2e-12	47.5	Kelch-like protein 33-like, BTB/POZ domain
`XP_057805764.1`	Pfam	`PF07707`	BACK	Domain	272	364	4.6e-10	40.2	BTB And C-terminal Kelch
`XP_057805766.1`	Pfam	`PF00651`	BTB	Domain	151	239	8e-14	52.5	BTB/POZ domain
`XP_057805766.1`	Pfam	`PF21536`	BTB_KLHL33	Domain	170	234	2e-12	47.5	Kelch-like protein 33-like, BTB/POZ domain
`XP_057805766.1`	Pfam	`PF07707`	BACK	Domain	265	357	4.3e-10	40.3	BTB And C-terminal Kelch

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057949783.1
AAAGGGATTTGTTTTTTGAAAATATTGATATAAATATATAGCAAAAAAAGAAAAAGCAATTTGCCCAAAACAGAAGGCAAATCAGGAAGAAGACTTTGAAACCCAAAACACAGAACACAACTTCGCATCCGTGAATTCTCTCTCGCTCCTCTCTCATTATACACTGCTCCTCTCAGTGGATAACGAGAAAGGTTTTAGAGAGAGAAAACGCCGCAATTATGAGGGATTCGGGTCTGGATCTGTTCGACCCGAGCGCCACC...

XM_057949781.1
GAAAAAGCAATTTGCCCAAAACAGAAGGCAAATCAGGAAGAAGACTTTGAAACCCAAAACACAGAACACAACTTCGCATCCGTGAATTCTCTCTCGCTCCTCTCTCATTATACACTGCTCCTCTCAGTGGATAACGAGAAAGGTTTTAGAGAGAGAAAACGCCGCAATTATGAGGGATTCGGGTCTGGATCTGTTCGACCCGAGCGCCACCGTCATGGACTCCGCATACAGCTCCTCCCCCAGCGGCAGCCGCGACCCCG...

CDS

2 records

下载 CDS FASTA

LOC131020772
ATGAGGGATTCGGGTCTGGATCTGTTCGACCCGAGCGCCACCGTCATGGACTCCGCATACAGCTCCTCCCCCAGCGGCAGCCGCGACCCCGATTTCGGCTTCGCCTTCAACGACAGCAATTTCTCCGACCGCGTGCTTCGAATCGAGATTGTCGCCGATTGCGCCGACGCCGTGCCCGAACCCGACGGTTGCAAAACCCTAGCTGATTGGGCGCTGCGCAAGAGCAAGCGGCGCCGTGGGGACATAGCTAGGAAGGAGAA...

Protein

2 records

下载 Protein FASTA

XP_057805764.1
MRDSGLDLFDPSATVMDSAYSSSPSGSRDPDFGFAFNDSNFSDRVLRIEIVADCADAVPEPDGCKTLADWALRKSKRRRGDIARKENDMYHSFAALDINNCPEEQILDGQPEAEDGVGDENHDEEEIPMIEDSPSGDEAVHSDDSNWSEDGSRVIRVKTLHISSPILAAKSPFFYKLFSNGMMESEQRHVTLRINASEEAALMELLNFMYSNTLSTNTAPALLDVLMAADKFEVASCMRHCSRLLRTLPMTPESALLYLD...

XP_057805766.1
MRDSGLDLFDPSATVMDSAYSSSPSGSRDPDFGFAFNDSNFSDRVLRIEIVADCADAVPEPDGCKTLADWALRKSKRRRGDIARKENALDINNCPEEQILDGQPEAEDGVGDENHDEEEIPMIEDSPSGDEAVHSDDSNWSEDGSRVIRVKTLHISSPILAAKSPFFYKLFSNGMMESEQRHVTLRINASEEAALMELLNFMYSNTLSTNTAPALLDVLMAADKFEVASCMRHCSRLLRTLPMTPESALLYLDLPSSVLM...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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