当前解析结果
SmilChr04G004046| 统一新 Gene ID | SmilChr04G004046 |
|---|---|
| 名称 | SmilChr04G004046 |
| 描述 | uncharacterized SmilChr04G004046 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 55679129 - 55680176 / + |
| NCBI Gene ID | LOC131020917 |
|---|---|
| GeneID | 131020917 |
| locus_tag | - |
| NCBI Name | LOC131020917 |
| 原始查询 | LOC131020917 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819769]; symbol=AT3G05980; hit=AT3G05980; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819769]; symbol=AT3G05980; hit=AT3G05980; species=arabidopsis; confidence=medium |
| Arabidopsis | AT3G05980 (AT3G05980)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819769] identity=43.3; qcov=0.848; evalue=6.76e-42; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131020917 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057805950.1 |
| 2 | Nucleus | 细胞核 | 0.20000 | XP_057805950.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057805950.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057805950.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057805950.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:55679225 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr4:55679484 |
G |
GC |
1bp_insertion | frameshift_variant | 75 | A1,A10,A13,A14,A16,A5,A7,A8,A9,B1,B100,B101,B104,B117,B120,B121,B124,B128,B129,B130,B132,B133,B134,B136,B137,B14,B140,B16,B17,B2,B21,B22,B24,B28,B30,B35,B42,B43,B45,B46,B49,B6,B61,B62,B73,B74,B8,B80,B83,B87,B88,B9,B97,C1,C16,C19,C22,C26,C3,C35,C37,C38,C55,C61,C67,C69,C7,C72,C75,C76,C77,D1,D10,D4,D8 |
Chr4:55679522 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C72 |
Chr4:55679603 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B135,B60,C80 |
Chr4:55679647 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B8,C32,C68 |
Chr4:55679804 |
AT |
A |
1bp_deletion | frameshift_variant | 1 | C59 |
Chr4:55679804 |
AT |
A |
1bp_deletion | CDS_variant | 1 | C59 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。