当前解析结果
SmilChr01G001836| 统一新 Gene ID | SmilChr01G001836 |
|---|---|
| 名称 | SmilChr01G001836 |
| 描述 | uncharacterized SmilChr01G001836 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 33293736 - 33296848 / + |
| NCBI Gene ID | LOC131021124 |
|---|---|
| GeneID | 131021124 |
| locus_tag | - |
| NCBI Name | LOC131021124 |
| 原始查询 | LOC131021124 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817305]; symbol=AT2G27590; hit=AT2G27590; species=arabidopsis; confidence=high |
| 产物 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817305]; symbol=AT2G27590; hit=AT2G27590; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G27590 (AT2G27590)S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817305] identity=69.4; qcov=0.824; evalue=1.07e-170; confidence=high |
| Rice | Os01g0858700- identity=59; qcov=0.893; evalue=4.99e-153; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131021124 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057806199.1 |
| 2 | Nucleoplasm | 核质 | 1.00000 | XP_057806199.1 |
| 3 | Cytoplasm | 细胞质 | 0.80000 | XP_057806199.1 |
| 4 | Cytosol | 细胞质基质 | 0.60000 | XP_057806199.1 |
| 5 | Nucleolus | 核仁 | 0.40000 | XP_057806199.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:33293864 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B133,B28 |
Chr1:33293949 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B61 |
Chr1:33293976 |
C |
T |
EMS_canonical_SNV | stop_gained | 8 | B107,B126,B2,B34,B94,C24,C37,C8 |
Chr1:33294016 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A6,B100,C22,C32 |
Chr1:33294028 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr1:33294038 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B14,D1,D4 |
Chr1:33294205 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B109,C79 |
Chr1:33294225 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B14,B30,C54 |
Chr1:33294246 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B19,B33,D8 |
Chr1:33294253 |
AG |
A |
1bp_deletion | frameshift_variant | 2 | B133,B14 |
Chr1:33294253 |
AG |
A |
1bp_deletion | CDS_variant | 2 | B133,B14 |
Chr1:33294257 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B78,C58 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。