当前解析结果
SmilChr04G002136| 统一新 Gene ID | SmilChr04G002136 |
|---|---|
| 名称 | SmilChr04G002136 |
| 描述 | uncharacterized SmilChr04G002136 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 34341697 - 34345753 / - |
| NCBI Gene ID | LOC131021293 |
|---|---|
| GeneID | 131021293 |
| locus_tag | - |
| NCBI Name | LOC131021293 |
| 原始查询 | LOC131021293 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:838466]; symbol=AT1G18850; hit=AT1G18850; species=arabidopsis; confidence=high |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:838466]; symbol=AT1G18850; hit=AT1G18850; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G18850 (AT1G18850)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:838466] identity=48; qcov=0.973; evalue=1.81e-126; confidence=high |
| Rice | Os01g0112100- identity=39.8; qcov=0.607; evalue=6.69e-55; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131021293 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057806402.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057806402.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057806402.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057806402.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057806402.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:34343522 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A22,B76,C49 |
Chr4:34343642 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr4:34343678 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B46,B75 |
Chr4:34343769 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B46,B75 |
Chr4:34343945 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A13,C8 |
Chr4:34343952 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C37 |
Chr4:34343954 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr4:34344104 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B118,B41,B65,C11,C69 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。