当前解析结果
SmilChr04G002394| 统一新 Gene ID | SmilChr04G002394 |
|---|---|
| 名称 | SmilChr04G002394 |
| 描述 | uncharacterized SmilChr04G002394 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 38465607 - 38466626 / - |
| NCBI Gene ID | LOC131021526 |
|---|---|
| GeneID | 131021526 |
| locus_tag | - |
| NCBI Name | LOC131021526 |
| 原始查询 | LOC131021526 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:842637]; symbol=AT1G63310; hit=AT1G63310; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:842637]; symbol=AT1G63310; hit=AT1G63310; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G63310 (AT1G63310)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:842637] identity=44.8; qcov=0.802; evalue=3.76e-25; confidence=medium |
| Rice | Os04g0105200 (OSJNBb0004G23.2)- identity=34.9; qcov=0.772; evalue=1.49e-12; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131021526 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.40000 | XP_057806736.1 |
| 2 | Cytosol | 细胞质基质 | 0.40000 | XP_057806736.1 |
| 3 | Cell membrane | 细胞膜 | 0.40000 | XP_057806736.1 |
| 4 | Vacuole | 液泡 | 0.20000 | XP_057806736.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057806736.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:38466077 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B85 |
Chr4:38466097 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B130,B31,B64,C45,C50 |
Chr4:38466109 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr4:38466112 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C3 |
Chr4:38466203 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A24,C42 |
Chr4:38466226 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B80 |
Chr4:38466265 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B83,C21,C29,C59 |
Chr4:38466298 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B130,B31,B64,B65,C45 |
Chr4:38466310 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C48 |
Chr4:38466349 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B41 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。