当前解析结果
SmilChr04G002713| 统一新 Gene ID | SmilChr04G002713 |
|---|---|
| 名称 | SmilChr04G002713 |
| 描述 | uncharacterized SmilChr04G002713 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 42743316 - 42745112 / + |
| NCBI Gene ID | LOC131021818 |
|---|---|
| GeneID | 131021818 |
| locus_tag | - |
| NCBI Name | LOC131021818 |
| 原始查询 | LOC131021818 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | cell wall integrity/stress response component-like protein [Source:NCBI gene (formerly Entrezgene);Acc:830143]; symbol=AT4G39840; hit=AT4G39840; species=arabidopsis; confidence=high |
| 产物 | cell wall integrity/stress response component-like protein [Source:NCBI gene (formerly Entrezgene);Acc:830143]; symbol=AT4G39840; hit=AT4G39840; species=arabidopsis; confidence=high |
| Arabidopsis | AT4G39840 (AT4G39840)cell wall integrity/stress response component-like protein [Source:NCBI gene (formerly Entrezgene);Acc:830143] identity=56.5; qcov=0.911; evalue=1.37e-120; confidence=high |
| Rice | Os08g0411300- identity=32.5; qcov=0.916; evalue=1.28e-56; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131021818 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057807090.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 1.00000 | XP_057807090.1 |
| 3 | Nucleus membrane | 核膜 | 0.40000 | XP_057807090.1 |
| 4 | Golgi apparatus | 高尔基体 | 0.20000 | XP_057807090.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057807090.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:42743834 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A1,B139,C18,C22,C27 |
Chr4:42744041 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr4:42744058 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C23 |
Chr4:42744096 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B75,B99 |
Chr4:42744378 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B35,B75,B99,C42 |
Chr4:42744528 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A4,C58 |
Chr4:42744591 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B108,B27,B75,B99 |
Chr4:42744609 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr4:42744693 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B126 |
Chr4:42744756 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C64 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。