Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G002729`

染色体: Chr04 坐标: 42908579-42915947 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G002729`
名称	SmilChr04G002729
描述	probable mitochondrial adenine nucleotide transporter BTL3
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	42908579 - 42915947 / `+`

ID 对照

NCBI Gene ID	`LOC131021830`
GeneID	`131021830`
locus_tag	`-`
NCBI Name	`LOC131021830`
原始查询	`LOC131021830`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	probable mitochondrial adenine nucleotide transporter BTL3
产物	probable mitochondrial adenine nucleotide transporter BTL3
Arabidopsis	`AT5G64970` (AT5G64970) Mitochondrial substrate carrier family protein [Source:NCBI gene (formerly Entrezgene);Acc:836621] identity=78.3; qcov=0.702; evalue=1.96e-178; confidence=high
Rice	`Os03g0191100` - identity=71; qcov=0.859; evalue=0; confidence=high
GO	GO:0055085 (transmembrane transport)
KEGG	-
Pfam	PF00153 (Mito_carr)
InterPro	-
eggNOG	-
NR	GeneID:131021830

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057807106.1`
2	Chloroplast membrane	叶绿体膜	1.00000	`XP_057807106.1`
3	Nucleus	细胞核	0.00000	`XP_057807106.1`
4	Chromosome	染色体	0.00000	`XP_057807106.1`
5	Centromere	着丝粒	0.00000	`XP_057807106.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr4:42908987`	`GC`	`G`	1bp_deletion	frameshift_variant	1	B137
`Chr4:42908987`	`GC`	`G`	1bp_deletion	CDS_variant	1	B137
`Chr4:42909075`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B34
`Chr4:42909105`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C2
`Chr4:42909115`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C58
`Chr4:42909151`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr4:42913285`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B108,B140,B24,B53
`Chr4:42914064`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D7
`Chr4:42914287`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B122,C11,C69

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057807106.1

448 aa

224

448

Mito_carr

PF00153 Mito_carr 153-238 aa PF00153 Mito_carr 245-333 aa PF00153 Mito_carr 360-445 aa

XP_057807107.1

446 aa

223

446

Mito_carr

PF00153 Mito_carr 151-236 aa PF00153 Mito_carr 243-331 aa PF00153 Mito_carr 358-443 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057807106.1`	Pfam	`PF00153`	Mito_carr	Repeat	153	238	6.4e-62	206.0	Mitochondrial carrier protein
`XP_057807106.1`	Pfam	`PF00153`	Mito_carr	Repeat	245	333	6.4e-62	206.0	Mitochondrial carrier protein
`XP_057807106.1`	Pfam	`PF00153`	Mito_carr	Repeat	360	445	6.4e-62	206.0	Mitochondrial carrier protein
`XP_057807107.1`	Pfam	`PF00153`	Mito_carr	Repeat	151	236	6.3e-62	206.1	Mitochondrial carrier protein
`XP_057807107.1`	Pfam	`PF00153`	Mito_carr	Repeat	243	331	6.3e-62	206.1	Mitochondrial carrier protein
`XP_057807107.1`	Pfam	`PF00153`	Mito_carr	Repeat	358	443	6.3e-62	206.1	Mitochondrial carrier protein

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057951124.1
TTGCAAAAGAGAGCAAAACCATTTACACTTTTTACACTTTAGGGAAAGCGTGGGACCCTTTAAAGCACCAATTGCTAAGCATGGCAGGAAACCGAACTGCAGGGATCATTGAGGAATGCGTAATGTGCATCTGCCGCCCGGCGATGGAAGCAATGCAGTGAATCAGAGCTCGTTATCAGTTAACGACGATCTGCGGCAGAATAATTTGCGTATAGGCGGCTTGTTTCTAGAAGAATCGCCTCCGGCGTCGTTTGTTTCCT...

XM_057951123.1
CAAAACCATTTACACTTTTTACACTTTAGGGAAAGCGTGGGACCCTTTAAAGCACCAATTGCTAAGCATGGCAGGAAACCGAACTGCAGGGATCATTGAGGAATGCGTAATGTGCATCTGCCGCCCGGCGATGGAAGCAATGCAGTGAATCAGTATCAGAGCTCGTTATCAGTTAACGACGATCTGCGGCAGAATAATTTGCGTATAGGCGGCTTGTTTCTAGAAGAATCGCCTCCGGCGTCGTTTGTTTCCTTGATTTC...

CDS

2 records

下载 CDS FASTA

LOC131021830
ATGCGTAATGTGCATCTGCCGCCCGGCGATGGAAGCAATGCAGTGAATCAGTATCAGAGCTCGTTATCAGTTAACGACGATCTGCGGCAGAATAATTTGCGTATAGGCGGCTTGTTTCTAGAAGAATCGCCTCCGGCGTCGTTTGTTTCCTTGATTTCTCCGAAGAAGAACGCCGTCGCGGCGGCGGCTGGGTGCTCCTATCGGAGGAGCCGTCGGAGGGGATTGGATGGAGGTAGGAGTCGGAGTCGAGGGTTTATATC...

LOC131021830
ATGCGTAATGTGCATCTGCCGCCCGGCGATGGAAGCAATGCAGTGAATCAGAGCTCGTTATCAGTTAACGACGATCTGCGGCAGAATAATTTGCGTATAGGCGGCTTGTTTCTAGAAGAATCGCCTCCGGCGTCGTTTGTTTCCTTGATTTCTCCGAAGAAGAACGCCGTCGCGGCGGCGGCTGGGTGCTCCTATCGGAGGAGCCGTCGGAGGGGATTGGATGGAGGTAGGAGTCGGAGTCGAGGGTTTATATCTGTGAC...

Protein

2 records

下载 Protein FASTA

XP_057807106.1
MRNVHLPPGDGSNAVNQYQSSLSVNDDLRQNNLRIGGLFLEESPPASFVSLISPKKNAVAAAAGCSYRRSRRRGLDGGRSRSRGFISVTLSSINGDGGGGRGSCDEELSVSSVLGNVGEKSVESENEDESEVLVLKEVVREEKSTSGGGGTFNTAKHLWAGAVAAMVSRTFVAPLERLKLEYIVRGEQRTLPELIKAIANSQGLRGFWKGNFVNILRTAPFKAINFYAYDTYRNQLLKVSGNKETTNFERFVAGAAAGIT...

XP_057807107.1
MRNVHLPPGDGSNAVNQSSLSVNDDLRQNNLRIGGLFLEESPPASFVSLISPKKNAVAAAAGCSYRRSRRRGLDGGRSRSRGFISVTLSSINGDGGGGRGSCDEELSVSSVLGNVGEKSVESENEDESEVLVLKEVVREEKSTSGGGGTFNTAKHLWAGAVAAMVSRTFVAPLERLKLEYIVRGEQRTLPELIKAIANSQGLRGFWKGNFVNILRTAPFKAINFYAYDTYRNQLLKVSGNKETTNFERFVAGAAAGITAT...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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