当前解析结果
SmilChr04G000089| 统一新 Gene ID | SmilChr04G000089 |
|---|---|
| 名称 | SmilChr04G000089 |
| 描述 | uncharacterized SmilChr04G000089 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 793844 - 808807 / + |
| NCBI Gene ID | LOC131022016 |
|---|---|
| GeneID | 131022016 |
| locus_tag | - |
| NCBI Name | LOC131022016 |
| 原始查询 | LOC131022016 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Transducin/WD40 repeat-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:824223]; symbol=AT3G50590; hit=AT3G50590; species=arabidopsis; confidence=high |
| 产物 | Transducin/WD40 repeat-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:824223]; symbol=AT3G50590; hit=AT3G50590; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G50590 (AT3G50590)Transducin/WD40 repeat-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:824223] identity=73.5; qcov=1.01; evalue=0; confidence=high |
| Rice | Os09g0407950- identity=71.6; qcov=0.579; evalue=0; confidence=medium |
| GO | GO:0000045 (autophagosome assembly); GO:0000421 (autophagosome membrane); GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131022016 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057807361.1 |
| 2 | Cytosol | 细胞质基质 | 0.60000 | XP_057807361.1 |
| 3 | Trans-golgi network | Trans-golgi network | 0.40000 | XP_057807361.1 |
| 4 | Cytoplasmic vesicle | 细胞质囊泡 | 0.20000 | XP_057807361.1 |
| 5 | Golgi apparatus | 高尔基体 | 0.20000 | XP_057807361.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:794313 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B131,B52,C86,D11 |
Chr4:796701 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr4:796706 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr4:797220 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr4:798713 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B51 |
Chr4:801991 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B62 |
Chr4:802702 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr4:802704 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B70,C2 |
Chr4:802718 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C52 |
Chr4:802934 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C27,C43 |
Chr4:804514 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C17,C79 |
Chr4:804745 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B131,B52,C86 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。