当前解析结果
SmilChr04G000182| 统一新 Gene ID | SmilChr04G000182 |
|---|---|
| 名称 | SmilChr04G000182 |
| 描述 | uncharacterized SmilChr04G000182 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 1624617 - 1628634 / + |
| NCBI Gene ID | LOC131022110 |
|---|---|
| GeneID | 131022110 |
| locus_tag | - |
| NCBI Name | LOC131022110 |
| 原始查询 | LOC131022110 |
| 来源 | GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:NCBI gene (formerly Entrezgene);Acc:827416]; symbol=AT4G17080; hit=AT4G17080; species=arabidopsis; confidence=high |
| 产物 | Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:NCBI gene (formerly Entrezgene);Acc:827416]; symbol=AT4G17080; hit=AT4G17080; species=arabidopsis; confidence=high |
| Arabidopsis | AT4G17080 (AT4G17080)Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:NCBI gene (formerly Entrezgene);Acc:827416] identity=67.5; qcov=0.745; evalue=1.44e-169; confidence=high |
| Rice | Os10g0565000- identity=78; qcov=0.568; evalue=6.4e-148; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | PF02493 (MORN) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131022110 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus membrane | 核膜 | 0.80000 | XP_057807492.1 |
| 2 | Nucleus | 细胞核 | 0.20000 | XP_057807492.1 |
| 3 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057807492.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057807492.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057807492.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:1625244 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C87 |
Chr4:1625286 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B62,B85 |
Chr4:1625394 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B131 |
Chr4:1625586 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B48,C12,C36,D3 |
Chr4:1625604 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B27,C17,C3,C42 |
Chr4:1625655 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C40 |
Chr4:1625934 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B8 |
Chr4:1625949 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B66,B85 |
Chr4:1627634 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B115 |
Chr4:1627718 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr4:1627808 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A8,B129 |
Chr4:1627829 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B1,B14,D5 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057807492.1PF02493
MORN 249-268 aa
PF02493
MORN 272-294 aa
PF02493
MORN 295-317 aa
PF02493
MORN 318-340 aa
PF02493
MORN 341-363 aa
PF02493
MORN 364-386 aa
PF02493
MORN 387-408 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057807492.1 |
Pfam | PF02493 |
MORN | Repeat | 249 | 268 | 1.2e-40 | 135.7 | MORN repeat |
XP_057807492.1 |
Pfam | PF02493 |
MORN | Repeat | 272 | 294 | 1.2e-40 | 135.7 | MORN repeat |
XP_057807492.1 |
Pfam | PF02493 |
MORN | Repeat | 295 | 317 | 1.2e-40 | 135.7 | MORN repeat |
XP_057807492.1 |
Pfam | PF02493 |
MORN | Repeat | 318 | 340 | 1.2e-40 | 135.7 | MORN repeat |
XP_057807492.1 |
Pfam | PF02493 |
MORN | Repeat | 341 | 363 | 1.2e-40 | 135.7 | MORN repeat |
XP_057807492.1 |
Pfam | PF02493 |
MORN | Repeat | 364 | 386 | 1.2e-40 | 135.7 | MORN repeat |
XP_057807492.1 |
Pfam | PF02493 |
MORN | Repeat | 387 | 408 | 1.2e-40 | 135.7 | MORN repeat |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。