当前解析结果
SmilChr01G001996| 统一新 Gene ID | SmilChr01G001996 |
|---|---|
| 名称 | SmilChr01G001996 |
| 描述 | uncharacterized SmilChr01G001996 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 35428585 - 35432335 / + |
| NCBI Gene ID | LOC131022562 |
|---|---|
| GeneID | 131022562 |
| locus_tag | - |
| NCBI Name | LOC131022562 |
| 原始查询 | LOC131022562 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | ubiquitin carboxyl-terminal hydrolase [Source:NCBI gene (formerly Entrezgene);Acc:832265]; symbol=AT5G22040; hit=AT5G22040; species=arabidopsis; confidence=high |
| 产物 | ubiquitin carboxyl-terminal hydrolase [Source:NCBI gene (formerly Entrezgene);Acc:832265]; symbol=AT5G22040; hit=AT5G22040; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G22040 (AT5G22040)ubiquitin carboxyl-terminal hydrolase [Source:NCBI gene (formerly Entrezgene);Acc:832265] identity=45.6; qcov=0.919; evalue=1.17e-58; confidence=high |
| Rice | Os03g0274700- identity=39.6; qcov=0.901; evalue=3.13e-35; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131022562 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057808057.1 |
| 2 | Nucleoplasm | 核质 | 0.80000 | XP_057808057.1 |
| 3 | Nuclear speckle | 核斑点 | 0.40000 | XP_057808057.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057808057.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057808057.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:35428873 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C43 |
Chr1:35431010 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A11 |
Chr1:35431021 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B48,C30,D5 |
Chr1:35431860 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A2,B48,C30,D5 |
Chr1:35431975 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B66 |
Chr1:35432094 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。