Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G000970`

染色体: Chr04 坐标: 13024982-13029987 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G000970`
名称	SmilChr04G000970
描述	uncharacterized SmilChr04G000970
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	13024982 - 13029987 / `-`

ID 对照

NCBI Gene ID	`LOC131022780`
GeneID	`131022780`
locus_tag	`-`
NCBI Name	`LOC131022780`
原始查询	`LOC131022780`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	stress response NST1-like protein [Source:NCBI gene (formerly Entrezgene);Acc:824328]; symbol=AT3G51650; hit=AT3G51650; species=arabidopsis; confidence=high
产物	stress response NST1-like protein [Source:NCBI gene (formerly Entrezgene);Acc:824328]; symbol=AT3G51650; hit=AT3G51650; species=arabidopsis; confidence=high
Arabidopsis	`AT3G51650` (AT3G51650) stress response NST1-like protein [Source:NCBI gene (formerly Entrezgene);Acc:824328] identity=52.4; qcov=0.979; evalue=0; confidence=high
Rice	`Os11g0113200` - identity=40.4; qcov=1.06; evalue=2.92e-146; confidence=medium
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131022780

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus membrane	核膜	0.80000	`XP_057808287.1`
2	Nucleus	细胞核	0.40000	`XP_057808287.1`
3	Golgi apparatus	高尔基体	0.20000	`XP_057808287.1`
4	Peroxisome	过氧化物酶体	0.20000	`XP_057808287.1`
5	Chromosome	染色体	0.00000	`XP_057808287.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr4:13025227`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B120,B62
`Chr4:13026905`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B64
`Chr4:13027528`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A16,B28,B83,C59
`Chr4:13027566`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C23
`Chr4:13027584`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B52
`Chr4:13027586`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B21,B36,B90,B92,C31
`Chr4:13027601`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B41
`Chr4:13028051`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C18
`Chr4:13028113`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B114
`Chr4:13028142`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B124,B79
`Chr4:13028358`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B18
`Chr4:13028760`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B120,B62

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057952305.1
TTTCCCTTCCCTAAAATGTTTCTCTCTCTTATCTCTATTTTCTTGTCAAATATTTTCTCTCTCATCCAAAATCATCAAATCATCGCCTGAAAAGTTCGCCGCCAACCTCTTTTTTAGCTGATGGCCGGAACATTGGTGGTAACACGTAAATCGCGTCGCTAGCGTTTGGAGGAATTGCTGGAATCGGTTTTGCATTAGAAGCATTTCTGAGAATAGGAGTTTCTAGGGTTTTGTGTTAGTGATTGAGGAAGGTGGGGGAT...

XM_057952304.1
TTTCCCTTCCCTAAAATGTTTCTCTCTCTTATCTCTATTTTCTTGTCAAATATTTTCTCTCTCATCCAAAATCATCAAATCATCGCCTGAAAAGTTCGCCGCCAACCTCTTTTTTAGCTGATGGCCGGAACATTGGTGGTAACACGTAAATCGCGTCGCTAGCGTTTGGAGGAATTGCTGGAATCGGTTTTGCATTAGAAGCATTTCTGAGAATAGGAGTTTCTAGGGTTTTGTGTTAGTGATTGAGGAAGGTGGGGGAT...

CDS

2 records

下载 CDS FASTA

LOC131022780
ATGTGTATACTTTGCGTGATTCAGAAGTGGTCGCGGAGGATTGCTACCATGTTGCCATGGCTAGTAATACCACTGATTGGGCTATGGGCTCTTTCGCAGCTCTTGCCACCGGCGTTCCGATTTGAAATCACGTCCCCGAGGCTTGCTTGCTTGTTAGTTCTGTTGGTAACACTGTTCTGGTACGAGGTTCTGATGCCTCAGTTGTCAGCATGGAGGGTCAGGAGGAATGATAGGCTTAGGGAGAGGAAAAGGTTTGAGGC...

Protein

2 records

下载 Protein FASTA

XP_057808287.1
MCILCVIQKWSRRIATMLPWLVIPLIGLWALSQLLPPAFRFEITSPRLACLLVLLVTLFWYEVLMPQLSAWRVRRNDRLRERKRFEAIEMQKLRKTATRRCRNCLTAYRDQNPGGGKFMCSYCGHISKRPVLDLPVPPGMGNSGILKDLVGKGGKILNGKAWSDNGWICGQDWLENGNWVAGPFAGKSNWKRNGGGLFGGEDDHCLAEKSYSRVFIFACKALTAFLLSIMWVWRKIFRVSSSGDDTSSDSERRGMLDNQS...

XP_057808288.1
MCILCVIQKWSRRIATMLPWLVIPLIGLWALSQLLPPAFRFEITSPRLACLLVLLVTLFWYEVLMPQLSAWRVRRNDRLRERKRFEAIEMQKLRKTATRRCRNCLTAYRDQNPGGGKFMCSYCGHISKRPVLDLPVPPGMGNSGILKDLVGKGGKILNGKAWSDNGWICGQDWLENGNWVAGPFAGKSNWKRNGGGLFGGEDDHCLAEKSYSRVFIFACKALTAFLLSIMWVWRKIFRVSSSGDDTSSDSERRGMLDNQS...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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