当前解析结果
SmilChr04G000613| 统一新 Gene ID | SmilChr04G000613 |
|---|---|
| 名称 | SmilChr04G000613 |
| 描述 | zinc finger protein 3-like |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 6923109 - 6923948 / + |
| NCBI Gene ID | LOC131022912 |
|---|---|
| GeneID | 131022912 |
| locus_tag | - |
| NCBI Name | LOC131022912 |
| 原始查询 | LOC131022912 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | zinc finger protein 3-like |
| 产物 | zinc finger protein 3-like |
| Arabidopsis | AT5G10970 (AT5G10970)C2H2 and C2HC zinc fingers superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:830964] identity=35.1; qcov=0.613; evalue=2.65e-16; confidence=low |
| Rice | Os07g0593000 (OsZFP7)- identity=42.7; qcov=0.294; evalue=7.14e-12; confidence=weak |
| GO | GO:0009788 (negative regulation of abscisic acid-activated signaling pathway) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131022912 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057808436.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057808436.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057808436.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057808436.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057808436.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:6923156 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C8 |
Chr4:6923190 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C84 |
Chr4:6923210 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B65,B77 |
Chr4:6923211 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B139,B98,C18,C22,C44 |
Chr4:6923215 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B16,B53,D10 |
Chr4:6923321 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C8 |
Chr4:6923411 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B82 |
Chr4:6923510 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C35 |
Chr4:6923623 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B22 |
Chr4:6923700 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A7 |
Chr4:6923737 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B46,C37 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。