当前解析结果
SmilChr04G001748| 统一新 Gene ID | SmilChr04G001748 |
|---|---|
| 名称 | SmilChr04G001748 |
| 描述 | receptor-like protein kinase ANXUR1 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 28792214 - 28793231 / + |
| NCBI Gene ID | LOC131023242 |
|---|---|
| GeneID | 131023242 |
| locus_tag | - |
| NCBI Name | LOC131023242 |
| 原始查询 | LOC131023242 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | receptor-like protein kinase ANXUR1 |
| 产物 | receptor-like protein kinase ANXUR1 |
| Arabidopsis | AT3G04690 (ANX1)Malectin/receptor-like protein kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:819627] identity=52.9; qcov=0.902; evalue=1.23e-99; confidence=high |
| Rice | Os01g0769700 (DRUS2)- identity=54; qcov=0.929; evalue=1.57e-103; confidence=high |
| GO | GO:0004714 (transmembrane receptor protein tyrosine kinase activity); GO:0005524 (ATP binding); GO:0005886 (plasma membrane); GO:0009506 (plasmodesma); GO:0046777 (protein autophosphorylation) |
| KEGG | - |
| Pfam | PF00069 (Pkinase); PF07714 (PK_Tyr_Ser-Thr) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131023242 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057808765.1 |
| 2 | Cytosol | 细胞质基质 | 0.40000 | XP_057808765.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057808765.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057808765.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057808765.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:28792273 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C1,C36,C59 |
Chr4:28792275 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A18,B108,B64 |
Chr4:28792299 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C23 |
Chr4:28792303 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B10,B81,C42,C6 |
Chr4:28792366 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B79,B95 |
Chr4:28792395 |
C |
T |
EMS_canonical_SNV | stop_gained | 2 | B124,B79 |
Chr4:28792395 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B124,B79 |
Chr4:28792457 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C1 |
Chr4:28792520 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A16,C18 |
Chr4:28792529 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B50 |
Chr4:28792556 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr4:28792567 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B114,C48 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057808765.1PF00069
Pkinase 27-286 aa
PF07714
PK_Tyr_Ser-Thr 31-288 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057808765.1 |
Pfam | PF00069 |
Pkinase | Domain | 27 | 286 | 5.4e-48 | 164.4 | Protein kinase domain |
XP_057808765.1 |
Pfam | PF07714 |
PK_Tyr_Ser-Thr | Domain | 31 | 288 | 3.5e-51 | 174.7 | Protein tyrosine and serine/threonine kinase |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。