当前解析结果
SmilChr04G001939| 统一新 Gene ID | SmilChr04G001939 |
|---|---|
| 名称 | SmilChr04G001939 |
| 描述 | uncharacterized SmilChr04G001939 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 31501114 - 31503327 / - |
| NCBI Gene ID | LOC131023290 |
|---|---|
| GeneID | 131023290 |
| locus_tag | - |
| NCBI Name | LOC131023290 |
| 原始查询 | LOC131023290 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:827439]; symbol=AT4G17250; hit=AT4G17250; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:827439]; symbol=AT4G17250; hit=AT4G17250; species=arabidopsis; confidence=medium |
| Arabidopsis | AT4G17250 (AT4G17250)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:827439] identity=41.4; qcov=0.97; evalue=2.53e-171; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131023290 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum membrane | 内质网膜 | 0.60000 | XP_057808820.1 |
| 2 | Nucleus membrane | 核膜 | 0.40000 | XP_057808820.1 |
| 3 | Endoplasmic reticulum | 内质网 | 0.40000 | XP_057808820.1 |
| 4 | Cell membrane | 细胞膜 | 0.20000 | XP_057808820.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057808820.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:31501157 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B31 |
Chr4:31501207 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B1 |
Chr4:31501208 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B7 |
Chr4:31501233 |
G |
A |
EMS_canonical_SNV | stop_gained | 5 | B100,B139,B41,C30,C76 |
Chr4:31501233 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B100,B139,B41,C30,C76 |
Chr4:31501317 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A22,B121,B81 |
Chr4:31501321 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A19,B13,B35 |
Chr4:31501406 |
GT |
G |
1bp_deletion | frameshift_variant | 5 | B42,B43,C32,C68,C8 |
Chr4:31501406 |
GT |
G |
1bp_deletion | CDS_variant | 5 | B42,B43,C32,C68,C8 |
Chr4:31501526 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A21 |
Chr4:31501528 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A20,C54,C86 |
Chr4:31501761 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B31 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。