当前解析结果
SmilChr04G001940| 统一新 Gene ID | SmilChr04G001940 |
|---|---|
| 名称 | SmilChr04G001940 |
| 描述 | uncharacterized SmilChr04G001940 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 31523798 - 31525972 / + |
| NCBI Gene ID | LOC131023292 |
|---|---|
| GeneID | 131023292 |
| locus_tag | - |
| NCBI Name | LOC131023292 |
| 原始查询 | LOC131023292 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:834808]; symbol=ASG7; hit=AT5G47580; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:834808]; symbol=ASG7; hit=AT5G47580; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G47580 (ASG7)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:834808] identity=37.7; qcov=1.01; evalue=3.61e-149; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131023292 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus membrane | 核膜 | 0.40000 | XP_057808821.1 |
| 2 | Endoplasmic reticulum | 内质网 | 0.40000 | XP_057808821.1 |
| 3 | Cell membrane | 细胞膜 | 0.20000 | XP_057808821.1 |
| 4 | Endoplasmic reticulum membrane | 内质网膜 | 0.20000 | XP_057808821.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057808821.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:31523830 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A19,B13,B35 |
Chr4:31524221 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C50 |
Chr4:31524331 |
C |
CCA |
2bp_insertion | frameshift_variant | 2 | B106,C65 |
Chr4:31524331 |
C |
CCA |
2bp_insertion | CDS_variant | 2 | B106,C65 |
Chr4:31524334 |
ATC |
A |
2bp_deletion | frameshift_variant | 1 | C65 |
Chr4:31524334 |
ATC |
A |
2bp_deletion | CDS_variant | 1 | C65 |
Chr4:31524345 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C65 |
Chr4:31524453 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | B44 |
Chr4:31524453 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr4:31524550 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B140,C33 |
Chr4:31524572 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B125,B90,B92,C87 |
Chr4:31524589 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B31 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。