当前解析结果
SmilChr04G002651| 统一新 Gene ID | SmilChr04G002651 |
|---|---|
| 名称 | SmilChr04G002651 |
| 描述 | secreted RxLR effector protein 161-like |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 41885763 - 41886341 / - |
| NCBI Gene ID | LOC131023457 |
|---|---|
| GeneID | 131023457 |
| locus_tag | - |
| NCBI Name | LOC131023457 |
| 原始查询 | LOC131023457 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | secreted RxLR effector protein 161-like |
| 产物 | secreted RxLR effector protein 161-like |
| Arabidopsis | AT4G23160 (CRK8)cysteine-rich RECEPTOR-like kinase [Source:NCBI gene (formerly Entrezgene);Acc:828415] identity=40.8; qcov=0.766; evalue=1.06e-33; confidence=medium |
| Rice | Os08g0125300- identity=52.4; qcov=0.995; evalue=8.67e-58; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131023457 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057808980.1 |
| 2 | Nucleus | 细胞核 | 0.80000 | XP_057808980.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057808980.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057808980.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057808980.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:41885784 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B90 |
Chr4:41885822 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B30,B67,B72,C19,C33 |
Chr4:41885877 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B102,B39,C17 |
Chr4:41885879 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A24,B49,B60,C52 |
Chr4:41885886 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C45,C79 |
Chr4:41885890 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A13 |
Chr4:41885892 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A13,B124,C22,D7 |
Chr4:41885904 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B124,B66,B75,C68,C76 |
Chr4:41885907 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B2,C15 |
Chr4:41885917 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B2,B49 |
Chr4:41885918 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B59,C81 |
Chr4:41885952 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B2,B49 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。