当前解析结果
SmilChr04G002721| 统一新 Gene ID | SmilChr04G002721 |
|---|---|
| 名称 | SmilChr04G002721 |
| 描述 | uncharacterized SmilChr04G002721 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 42832779 - 42833339 / + |
| NCBI Gene ID | LOC131023472 |
|---|---|
| GeneID | 131023472 |
| locus_tag | - |
| NCBI Name | LOC131023472 |
| 原始查询 | LOC131023472 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | nitric oxide synthase-interacting protein [Source:NCBI gene (formerly Entrezgene);Acc:836627]; symbol=AT5G65030; hit=AT5G65030; species=arabidopsis; confidence=medium |
| 产物 | nitric oxide synthase-interacting protein [Source:NCBI gene (formerly Entrezgene);Acc:836627]; symbol=AT5G65030; hit=AT5G65030; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G65030 (AT5G65030)nitric oxide synthase-interacting protein [Source:NCBI gene (formerly Entrezgene);Acc:836627] identity=36.1; qcov=1.03; evalue=8.81e-34; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131023472 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057808997.1 |
| 2 | Nucleus | 细胞核 | 0.20000 | XP_057808997.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057808997.1 |
| 4 | Cell membrane | 细胞膜 | 0.20000 | XP_057808997.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057808997.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:42832802 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B3 |
Chr4:42832808 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B3 |
Chr4:42832812 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B3 |
Chr4:42833135 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B122,C11,C69 |
Chr4:42833268 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B130,B140 |
Chr4:42833308 |
AAT |
A |
2bp_deletion | frameshift_variant | 3 | B121,B128,D2 |
Chr4:42833308 |
AAT |
A |
2bp_deletion | CDS_variant | 3 | B121,B128,D2 |
Chr4:42833313 |
T |
TCC |
2bp_insertion | frameshift_variant | 3 | B121,B128,D2 |
Chr4:42833313 |
T |
TCC |
2bp_insertion | CDS_variant | 3 | B121,B128,D2 |
Chr4:42833326 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B25 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。