当前解析结果
SmilChr04G003192| 统一新 Gene ID | SmilChr04G003192 |
|---|---|
| 名称 | SmilChr04G003192 |
| 描述 | uncharacterized SmilChr04G003192 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 48655414 - 48663859 / - |
| NCBI Gene ID | LOC131023544 |
|---|---|
| GeneID | 131023544 |
| locus_tag | - |
| NCBI Name | LOC131023544 |
| 原始查询 | LOC131023544 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| 产物 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G01050 (AT2G01050)zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629] identity=28.5; qcov=0.46; evalue=1.91e-23; confidence=low |
| Rice | Os09g0268800- identity=29.7; qcov=0.25; evalue=1.21e-07; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131023544 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057809073.1 |
| 2 | Cytoplasmic granule | 细胞质颗粒 | 0.60000 | XP_057809073.1 |
| 3 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.40000 | XP_057809073.1 |
| 4 | P-body | P-body | 0.40000 | XP_057809073.1 |
| 5 | Cytosol | 细胞质基质 | 0.40000 | XP_057809073.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:48655441 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B111 |
Chr4:48655605 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B13,B46 |
Chr4:48655618 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C3 |
Chr4:48655662 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B44,C3 |
Chr4:48655664 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B54 |
Chr4:48655784 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D3 |
Chr4:48655869 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B4 |
Chr4:48655903 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C42,D4 |
Chr4:48655910 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C3 |
Chr4:48655920 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B28 |
Chr4:48655937 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B28 |
Chr4:48655939 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C3 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。