当前解析结果
SmilChr04G001246| 统一新 Gene ID | SmilChr04G001246 |
|---|---|
| 名称 | SmilChr04G001246 |
| 描述 | uncharacterized SmilChr04G001246 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 19598630 - 19607667 / - |
| NCBI Gene ID | LOC131023678 |
|---|---|
| GeneID | 131023678 |
| locus_tag | - |
| NCBI Name | LOC131023678 |
| 原始查询 | LOC131023678 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Bax inhibitor-1 family protein [Source:NCBI gene (formerly Entrezgene);Acc:834759]; symbol=AT5G47130; hit=AT5G47130; species=arabidopsis; confidence=weak |
| 产物 | Bax inhibitor-1 family protein [Source:NCBI gene (formerly Entrezgene);Acc:834759]; symbol=AT5G47130; hit=AT5G47130; species=arabidopsis; confidence=weak |
| Arabidopsis | AT5G47130 (AT5G47130)Bax inhibitor-1 family protein [Source:NCBI gene (formerly Entrezgene);Acc:834759] identity=24.8; qcov=0.401; evalue=1.35e-11; confidence=weak |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131023678 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 0.80000 | XP_057809215.1 |
| 2 | Endoplasmic reticulum | 内质网 | 0.60000 | XP_057809218.1 |
| 3 | Vacuole | 液泡 | 0.20000 | XP_057809215.1 |
| 4 | Nucleus membrane | 核膜 | 0.20000 | XP_057809218.1 |
| 5 | Cytoplasmic vesicle | 细胞质囊泡 | 0.20000 | XP_057809218.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:19598980 |
G |
A |
EMS_canonical_SNV | stop_gained | 5 | A11,B24,B40,C28,C67 |
Chr4:19598980 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A11,B24,B40,C28,C67 |
Chr4:19601202 |
G |
A |
EMS_canonical_SNV | stop_gained | 80 | A11,A15,A19,A2,A20,A24,A5,A6,B100,B101,B103,B105,B106,B119,B12,B121,B127,B130,B133,B134,B135,B137,B138,B139,B15,B16,B17,B24,B26,B29,B32,B33,B38,B39,B40,B45,B47,B50,B52,B56,B57,B6,B64,B68,B85,B86,B88,B9,B94,B96,C1,C10,C12,C14,C22,C24,C25,C33,C34,C37,C38,C4,C40,C49,C51,C54,C56,C57,C60,C63,C64,C66,C70,C73,C74,C77,C8,C86,D1,D2 |
Chr4:19601220 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B25,D7 |
Chr4:19601354 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr4:19601505 |
T |
TC |
1bp_insertion | frameshift_variant | 24 | A23,B102,B111,B126,B127,B128,B133,B140,B17,B23,B3,B33,B37,B51,B69,B86,C15,C16,C17,C27,C36,C45,C47,D4 |
Chr4:19601739 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B101,B108,B27,C43 |
Chr4:19601786 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C85,D10,D11 |
Chr4:19601943 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr4:19602089 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C81,C82 |
Chr4:19602109 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr4:19603686 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
5 records
下载 cDNA FASTA5 records
下载 CDS FASTA5 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。