Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G002975`

染色体: Chr04 坐标: 46139536-46144539 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G002975`
名称	SmilChr04G002975
描述	monosaccharide-sensing protein 2-like
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	46139536 - 46144539 / `+`

ID 对照

NCBI Gene ID	`LOC131023779`
GeneID	`131023779`
locus_tag	`-`
NCBI Name	`LOC131023779`
原始查询	`LOC131023779`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	monosaccharide-sensing protein 2-like
产物	monosaccharide-sensing protein 2-like
Arabidopsis	`AT4G35300` (TMT2) tonoplast monosaccharide transporter2 [Source:NCBI gene (formerly Entrezgene);Acc:829684] identity=67.1; qcov=1.02; evalue=0; confidence=high
Rice	`Os02g0229400` (TMT2) - identity=70; qcov=1.03; evalue=0; confidence=high
GO	GO:0005366 (myo-inositol:proton symporter activity); GO:0016020 (membrane); GO:0055085 (transmembrane transport)
KEGG	-
Pfam	PF00083 (Sugar_tr); PF07690 (MFS_1)
InterPro	-
eggNOG	-
NR	GeneID:131023779

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Vacuole membrane	液泡膜	0.80000	`XP_057809347.1`
2	Vacuole	液泡	0.60000	`XP_057809347.1`
3	Secretory vesicle	Secretory vesicle	0.40000	`XP_057809347.1`
4	Cytoplasmic vesicle	细胞质囊泡	0.20000	`XP_057809347.1`
5	Vesicle	囊泡	0.20000	`XP_057809347.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr4:46140899`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr4:46141068`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B3,C13,C4
`Chr4:46141100`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B124,C16,C80,D3,D7
`Chr4:46142277`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C20,C58
`Chr4:46142377`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C20
`Chr4:46142437`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B85
`Chr4:46142451`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B122,C50
`Chr4:46142607`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C49
`Chr4:46142704`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B22,C8
`Chr4:46143425`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B88
`Chr4:46143887`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B1,B100
`Chr4:46143952`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B140,B69

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057809347.1

717 aa

358

717

Sugar_tr

MFS_1

Sugar_tr

PF00083 Sugar_tr 8-226 aa PF07690 MFS_1 13-208 aa PF00083 Sugar_tr 473-704 aa

XP_057809348.1

717 aa

358

717

Sugar_tr

MFS_1

Sugar_tr

PF00083 Sugar_tr 8-226 aa PF07690 MFS_1 13-208 aa PF00083 Sugar_tr 473-704 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057809347.1`	Pfam	`PF00083`	Sugar_tr	Family	8	226	8.5e-98	328.9	Sugar (and other) transporter
`XP_057809347.1`	Pfam	`PF07690`	MFS_1	Family	13	208	3.7e-29	102.4	Major Facilitator Superfamily
`XP_057809347.1`	Pfam	`PF00083`	Sugar_tr	Family	473	704	8.5e-98	328.9	Sugar (and other) transporter
`XP_057809348.1`	Pfam	`PF00083`	Sugar_tr	Family	8	226	8.5e-98	328.9	Sugar (and other) transporter
`XP_057809348.1`	Pfam	`PF07690`	MFS_1	Family	13	208	3.7e-29	102.4	Major Facilitator Superfamily
`XP_057809348.1`	Pfam	`PF00083`	Sugar_tr	Family	473	704	8.5e-98	328.9	Sugar (and other) transporter

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057953364.1
GAATCTTTCCAATAGAGAGAGAGAGATTGCAATAAAATAGAGGGCAATGCCAAGACGCACAGATCAGCGCGGCACGTTCTTGGATCGCCACCCATCTCCCTATTTGAACTCGTTTTCCGATCCCAACTCTCTCCTCTCACGTTTTGCCAGGTCTACACTTCTGTCTTCATCAACATTGCCTCTCTTACTCGCCAATTAACTCTGTCAAATAAATAAAAGTTTTCTCCTGTCCTTTTCCCTCTCTCAGCTTCCCACAAAGA...

XM_057953365.1
TAAAATAGAGGGCAATGCCAAGACGCACAGATCAGCGCGGCACGTTCTTGGATCGCCACCCATCTCCCTATTTGAACTCGTTTTCCGATCCCAACTCTCTCCTCTCACGTTTTGCCAGCTTCCCACAAAGAGGACCCTCTTCCCCTCTCTCTTTCTCTCTATATATAAAGGTTGCGCCTTTAGTGGCATTGCATGTGACTGCTGTTTACATGCTGCGGGAGCCCCTTCTTCTTCCACTATCACATACTCTTGATGGCTTT...

CDS

2 records

下载 CDS FASTA

LOC131023779
ATGACGAGGGGAGCTGTGTTTGTTGCAATTGCGGCCGCCATTGGCAACTTCTTGCAAGGATGGGATAATGCTACCATTGCAGGATCTGTGCTTTACATCAAGAGGGAATTTCATTTGGAGACACAGCCTACAATAGAAGGGCTTATTGTTGCAACCTCCCTGATTGGGGCAACAGTTATCACTACATTTTCCGGACCAGTAGCTGATTGGCTCGGACGTCGTCCAATGCTAATAATCTCATCTGTTCTGTATTTTCTTAG...

Protein

2 records

下载 Protein FASTA

XP_057809347.1
MTRGAVFVAIAAAIGNFLQGWDNATIAGSVLYIKREFHLETQPTIEGLIVATSLIGATVITTFSGPVADWLGRRPMLIISSVLYFLSGLVMLWAPNVYMLLLARLLDGFGIGLAVTLVPVYISETAPPEIRGLLNTLPQFTGSAGMFLSYCMVFGMSLKASPSWRMMLGVLSIPSLLYFALALFYLPESPRWLVSKGRMKEAKKVLQQLRGREDVSGEMALLLEGLDVGGETAIEEYVISPDNDLSGNQDHEVEKDRIKL...

XP_057809348.1
MTRGAVFVAIAAAIGNFLQGWDNATIAGSVLYIKREFHLETQPTIEGLIVATSLIGATVITTFSGPVADWLGRRPMLIISSVLYFLSGLVMLWAPNVYMLLLARLLDGFGIGLAVTLVPVYISETAPPEIRGLLNTLPQFTGSAGMFLSYCMVFGMSLKASPSWRMMLGVLSIPSLLYFALALFYLPESPRWLVSKGRMKEAKKVLQQLRGREDVSGEMALLLEGLDVGGETAIEEYVISPDNDLSGNQDHEVEKDRIKL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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