Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G003120`

染色体: Chr04 坐标: 47759909-47767513 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G003120`
名称	SmilChr04G003120
描述	G-box-binding factor 1
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	47759909 - 47767513 / `-`

ID 对照

NCBI Gene ID	`LOC131023915`
GeneID	`131023915`
locus_tag	`-`
NCBI Name	`LOC131023915`
原始查询	`LOC131023915`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	G-box-binding factor 1
产物	G-box-binding factor 1
Arabidopsis	`AT4G36730` (GBF1) G-box binding factor 1 [Source:NCBI gene (formerly Entrezgene);Acc:829826] identity=53.2; qcov=0.964; evalue=5.39e-110; confidence=high
Rice	`Os03g0239400` (OsbZIP26) - identity=43.5; qcov=1.06; evalue=1.16e-56; confidence=medium
GO	GO:0003700 (DNA-binding transcription factor activity); GO:0005634 (nucleus); GO:0006355 (regulation of DNA-templated transcription); GO:0043565 (sequence-specific DNA binding)
KEGG	-
Pfam	PF00170 (bZIP_1); PF07716 (bZIP_2); PF07777 (MFMR); PF16596 (MFMR_assoc)
InterPro	-
eggNOG	-
NR	GeneID:131023915

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057809543.1`
2	Chromosome	染色体	0.00000	`XP_057809543.1`
3	Centromere	着丝粒	0.00000	`XP_057809543.1`
4	Chromatin	染色质	0.00000	`XP_057809543.1`
5	Telomere	端粒	0.00000	`XP_057809543.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr4:47760564`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C85
`Chr4:47762754`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr4:47762778`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B119,C51,C79
`Chr4:47763466`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B52,B87
`Chr4:47764606`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B97
`Chr4:47764626`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057809543.1

362 aa

181

362

MFMR

MFMR_assoc

bZIP_1

bZIP_2

PF07777 MFMR 1-96 aa PF16596 MFMR_assoc 119-230 aa PF00170 bZIP_1 264-326 aa PF07716 bZIP_2 266-318 aa

XP_057809544.1

362 aa

181

362

MFMR

MFMR_assoc

bZIP_1

bZIP_2

PF07777 MFMR 1-96 aa PF16596 MFMR_assoc 119-230 aa PF00170 bZIP_1 264-326 aa PF07716 bZIP_2 266-318 aa

XP_057809545.1

362 aa

181

362

MFMR

MFMR_assoc

bZIP_1

bZIP_2

PF07777 MFMR 1-96 aa PF16596 MFMR_assoc 119-230 aa PF00170 bZIP_1 264-326 aa PF07716 bZIP_2 266-318 aa

XP_057809546.1

362 aa

181

362

MFMR

MFMR_assoc

bZIP_1

bZIP_2

PF07777 MFMR 1-96 aa PF16596 MFMR_assoc 119-230 aa PF00170 bZIP_1 264-326 aa PF07716 bZIP_2 266-318 aa

XP_057809547.1

362 aa

181

362

MFMR

MFMR_assoc

bZIP_1

bZIP_2

PF07777 MFMR 1-96 aa PF16596 MFMR_assoc 119-230 aa PF00170 bZIP_1 264-326 aa PF07716 bZIP_2 266-318 aa

XP_057809548.1

361 aa

180

361

MFMR

MFMR_assoc

bZIP_1

bZIP_2

PF07777 MFMR 1-96 aa PF16596 MFMR_assoc 119-230 aa PF00170 bZIP_1 263-325 aa PF07716 bZIP_2 265-317 aa

XP_057809549.1

361 aa

180

361

MFMR

MFMR_assoc

bZIP_1

bZIP_2

PF07777 MFMR 1-96 aa PF16596 MFMR_assoc 119-230 aa PF00170 bZIP_1 263-325 aa PF07716 bZIP_2 265-317 aa

XP_057809550.1

361 aa

180

361

MFMR

MFMR_assoc

bZIP_1

bZIP_2

PF07777 MFMR 1-96 aa PF16596 MFMR_assoc 119-230 aa PF00170 bZIP_1 263-325 aa PF07716 bZIP_2 265-317 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057809543.1`	Pfam	`PF07777`	MFMR	Family	1	96	5.1e-33	114.2	G-box binding protein MFMR
`XP_057809543.1`	Pfam	`PF16596`	MFMR_assoc	Disordered	119	230	8.3e-08	33.5	Disordered region downstream of MFMR
`XP_057809543.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	264	326	3.8e-21	75.7	bZIP transcription factor
`XP_057809543.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	266	318	1.5e-08	35.3	Basic region leucine zipper
`XP_057809544.1`	Pfam	`PF07777`	MFMR	Family	1	96	5.1e-33	114.2	G-box binding protein MFMR
`XP_057809544.1`	Pfam	`PF16596`	MFMR_assoc	Disordered	119	230	8.3e-08	33.5	Disordered region downstream of MFMR
`XP_057809544.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	264	326	3.8e-21	75.7	bZIP transcription factor
`XP_057809544.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	266	318	1.5e-08	35.3	Basic region leucine zipper
`XP_057809545.1`	Pfam	`PF07777`	MFMR	Family	1	96	5.1e-33	114.2	G-box binding protein MFMR
`XP_057809545.1`	Pfam	`PF16596`	MFMR_assoc	Disordered	119	230	8.3e-08	33.5	Disordered region downstream of MFMR
`XP_057809545.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	264	326	3.8e-21	75.7	bZIP transcription factor
`XP_057809545.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	266	318	1.5e-08	35.3	Basic region leucine zipper
`XP_057809546.1`	Pfam	`PF07777`	MFMR	Family	1	96	5.1e-33	114.2	G-box binding protein MFMR
`XP_057809546.1`	Pfam	`PF16596`	MFMR_assoc	Disordered	119	230	8.3e-08	33.5	Disordered region downstream of MFMR
`XP_057809546.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	264	326	3.8e-21	75.7	bZIP transcription factor
`XP_057809546.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	266	318	1.5e-08	35.3	Basic region leucine zipper
`XP_057809547.1`	Pfam	`PF07777`	MFMR	Family	1	96	5.1e-33	114.2	G-box binding protein MFMR
`XP_057809547.1`	Pfam	`PF16596`	MFMR_assoc	Disordered	119	230	8.3e-08	33.5	Disordered region downstream of MFMR
`XP_057809547.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	264	326	3.8e-21	75.7	bZIP transcription factor
`XP_057809547.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	266	318	1.5e-08	35.3	Basic region leucine zipper
`XP_057809548.1`	Pfam	`PF07777`	MFMR	Family	1	96	1.7e-33	115.7	G-box binding protein MFMR
`XP_057809548.1`	Pfam	`PF16596`	MFMR_assoc	Disordered	119	230	8.3e-08	33.5	Disordered region downstream of MFMR
`XP_057809548.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	263	325	3.8e-21	75.7	bZIP transcription factor
`XP_057809548.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	265	317	1.5e-08	35.3	Basic region leucine zipper
`XP_057809549.1`	Pfam	`PF07777`	MFMR	Family	1	96	1.7e-33	115.7	G-box binding protein MFMR
`XP_057809549.1`	Pfam	`PF16596`	MFMR_assoc	Disordered	119	230	8.3e-08	33.5	Disordered region downstream of MFMR
`XP_057809549.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	263	325	3.8e-21	75.7	bZIP transcription factor
`XP_057809549.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	265	317	1.5e-08	35.3	Basic region leucine zipper
`XP_057809550.1`	Pfam	`PF07777`	MFMR	Family	1	96	1.7e-33	115.7	G-box binding protein MFMR
`XP_057809550.1`	Pfam	`PF16596`	MFMR_assoc	Disordered	119	230	8.3e-08	33.5	Disordered region downstream of MFMR
`XP_057809550.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	263	325	3.8e-21	75.7	bZIP transcription factor
`XP_057809550.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	265	317	1.5e-08	35.3	Basic region leucine zipper

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

8 records

下载 cDNA FASTA

XM_057953565.1
AAGAAGGAGAAAATAAAAAGAAAAAATATAAAAGACAGGCATGAGTCATCGCAAACACTTGGTTGCCGCGTCATGTCTATCCACTCAGTTTCCGCCAGTTGGATTCCTCTTCCCCCTCACGTGTCACCCTCCAAAACCCTACCACCCCATTCCGCAACCGTGCTCCACCACCACCACCACCACCACCACAGTTAGTTAACTTAATTACTTGTAGTCATTCCTTTTAGATTTTTCCGGGACACTTGATTTTTTTACTACTT...

XM_057953560.1
AAGAAGGAGAAAATAAAAAGAAAAAATATAAAAGACAGGCATGAGTCATCGCAAACACTTGGTTGCCGCGTCATGTCTATCCACTCAGTTTCCGCCAGTTGGATTCCTCTTCCCCCTCACGTGTCACCCTCCAAAACCCTACCACCCCATTCCGCAACCGTGCTCCACCACCACCACCACCACCACCACAGTTAGTTAACTTAATTACTTGTAGTCATTCCTTTTAGATTTTTCCGGGACACTTGATTTTTTTACTACTT...

CDS

8 records

下载 CDS FASTA

LOC131023915
ATGGGGGCTGGGGAAGAAAGCACTCCATCAAAATCATCCAAACCTGCATCCTCAGCGCAGGAAGCACCCGTTACACCTACTACGCCTGTGTATCCTGATTGGTCAAGTTCAATGCAGGCTTTTTATGGTGCTGGAGCAGCTCCACCTTTCTTTGCTTCAACTGTGGCTTCTCCCACTCCCCATCCTTACATGTGGGGAGGCCAGCATCCTATGATGCCACCTTATGGGACCCCTGTTCCATATCCAGCTTTATATCCTCC...

Protein

8 records

下载 Protein FASTA

XP_057809543.1
MGAGEESTPSKSSKPASSAQEAPVTPTTPVYPDWSSSMQAFYGAGAAPPFFASTVASPTPHPYMWGGQHPMMPPYGTPVPYPALYPPGGIYAHPNMAAPPGFVHGTAESDGKVTDGKDRPSSKKSKGASANHGMIGGKTGEGGKTASGSGNDGTHSAESGSEGSSDGSDENNQDFSTSKKGSFDQMLAEGANAQNNGVPTNFPNSVPGNPVVSVPATNLNIGMDLWNTTPTGSGPMKLRPNSVGVAQTVAPSGMMNDQWI...

XP_057809544.1
MGAGEESTPSKSSKPASSAQEAPVTPTTPVYPDWSSSMQAFYGAGAAPPFFASTVASPTPHPYMWGGQHPMMPPYGTPVPYPALYPPGGIYAHPNMAAPPGFVHGTAESDGKVTDGKDRPSSKKSKGASANHGMIGGKTGEGGKTASGSGNDGTHSAESGSEGSSDGSDENNQDFSTSKKGSFDQMLAEGANAQNNGVPTNFPNSVPGNPVVSVPATNLNIGMDLWNTTPTGSGPMKLRPNSVGVAQTVAPSGMMNDQWI...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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