Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G003163`

染色体: Chr04 坐标: 48260222-48264857 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G003163`
名称	SmilChr04G003163
描述	plastidic glucose transporter 4-like
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	48260222 - 48264857 / `+`

ID 对照

NCBI Gene ID	`LOC131023956`
GeneID	`131023956`
locus_tag	`-`
NCBI Name	`LOC131023956`
原始查询	`LOC131023956`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	plastidic glucose transporter 4-like
产物	plastidic glucose transporter 4-like
Arabidopsis	`AT5G16150` (PGLCT) plastidic GLC translocator [Source:NCBI gene (formerly Entrezgene);Acc:831472] identity=79.9; qcov=0.994; evalue=0; confidence=high
Rice	`Os01g0133400` (OsPGLCT) - identity=80.9; qcov=0.969; evalue=0; confidence=high
GO	GO:0005351 (carbohydrate:proton symporter activity); GO:0008643 (carbohydrate transport); GO:0016020 (membrane); GO:0055085 (transmembrane transport)
KEGG	-
Pfam	PF00083 (Sugar_tr); PF07690 (MFS_1)
InterPro	-
eggNOG	-
NR	GeneID:131023956

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Vacuole membrane	液泡膜	1.00000	`XP_057809607.1`
2	Vacuole	液泡	1.00000	`XP_057809609.1`
3	Nucleus	细胞核	0.00000	`XP_057809607.1`
4	Chromosome	染色体	0.00000	`XP_057809607.1`
5	Centromere	着丝粒	0.00000	`XP_057809607.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr4:48261303`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B21,B3,C13,C4
`Chr4:48261319`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C4
`Chr4:48263116`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C27
`Chr4:48263137`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A4
`Chr4:48263160`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C78
`Chr4:48263191`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A23,B75,B89,C43,C87
`Chr4:48263193`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B43,C60
`Chr4:48263198`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B1
`Chr4:48263213`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B21,B31,B83,C56,C72
`Chr4:48263230`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B126,B75,B9,C44
`Chr4:48263242`	`CT`	`C`	1bp_deletion	frameshift_variant	2	B113,C10
`Chr4:48263242`	`CT`	`C`	1bp_deletion	CDS_variant	2	B113,C10

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057809607.1

487 aa

244

487

Sugar_tr

MFS_1

PF00083 Sugar_tr 51-480 aa PF07690 MFS_1 53-394 aa

XP_057809608.1

487 aa

244

487

Sugar_tr

MFS_1

PF00083 Sugar_tr 51-480 aa PF07690 MFS_1 53-394 aa

XP_057809609.1

486 aa

243

486

Sugar_tr

MFS_1

PF00083 Sugar_tr 50-479 aa PF07690 MFS_1 52-392 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057809607.1`	Pfam	`PF00083`	Sugar_tr	Family	51	480	8.4e-105	352.0	Sugar (and other) transporter
`XP_057809607.1`	Pfam	`PF07690`	MFS_1	Family	53	394	1.3e-29	103.9	Major Facilitator Superfamily
`XP_057809608.1`	Pfam	`PF00083`	Sugar_tr	Family	51	480	8.4e-105	352.0	Sugar (and other) transporter
`XP_057809608.1`	Pfam	`PF07690`	MFS_1	Family	53	394	1.3e-29	103.9	Major Facilitator Superfamily
`XP_057809609.1`	Pfam	`PF00083`	Sugar_tr	Family	50	479	8.4e-105	352.0	Sugar (and other) transporter
`XP_057809609.1`	Pfam	`PF07690`	MFS_1	Family	52	392	2.3e-29	103.1	Major Facilitator Superfamily

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057953624.1
ATGGTAATAATATGAAAAAAGATATAGCACTTGTAATAAGAAATGCGAAGAAGATGATGAAAAGGCTATACTAGTGGAAATGCAGGCTTCCGCTTTCTCAATCAGAGCAAAATCGTTTCCCCCCCTACAGGATCCTAGTTTTTTGTTCAAGAGAAACAGGTTCACGCTAGTGAGTGCCGCCGCCGCTGATCCCAGAATTAGTGCCGGTTCCAGTTCCAATGGGAGGAAGAGAGAGTGTTCAGAGTTTGAACGGATCTTCA...

XM_057953625.1
AGAAGATGATGAAAAGGTTTGAGATCTCCACTCCACCAACTTGCTCACTCGCGAACAAAATACTAATCATCTTCTTAGACTTACTGGATCTCCTAATTCGACATTTTCCGCCTCATATTTATCTCCAATTTTATTCATTTTTTCATGTTATTTTCGCTGGATCGGTAGTCCTTCATCCATCGATTTCATGTGGCGCTAATGCTTCTTAATTTCGCAATTAAGTCGCCTTCTGACTTGCATTCAAGTGTCCGAGCGCCGTG...

CDS

3 records

下载 CDS FASTA

LOC131023956
ATGGGAGGAAGAGAGAGTGTTCAGAGTTTGAACGGATCTTCAGCCAAGAACAGATCAGTCAGAGCTCAAGCTTCTGAAGATGATCCAGAGGATCTTGCAACTGCCAAAATCCAAGCGAAATCATCTGGAAATGTTTATCCATATGTTGGTGTTGCTTGTTTAGGGGCCATTCTGTTTGGATATCATCTCGGGGTCGTAAATGGAGCTTTAGAGTACCTAGCCAAGGATCTTGGGATTGCGGAGAACACAGTGTTACAAGG...

Protein

3 records

下载 Protein FASTA

XP_057809607.1
MGGRESVQSLNGSSAKNRSVRAQASEDDPEDLATAKIQAKSSGNVYPYVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWVVSALLAGATVGSFTGGSLADKFGRTKTFVLDVIPLAVGAFLCAIAESVETMIIGRVVAGVGIGISSAIVPLYISEISPTEIRGTLGSVNQLFICIGILAALVVGLPLAGNPLWWRTMFSIAIVPSVLLAVGMVCSPESPRWLYQQGKIAEAEVSIRRLFGKERVAEVMGDL...

XP_057809608.1
MGGRESVQSLNGSSAKNRSVRAQASEDDPEDLATAKIQAKSSGNVYPYVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWVVSALLAGATVGSFTGGSLADKFGRTKTFVLDVIPLAVGAFLCAIAESVETMIIGRVVAGVGIGISSAIVPLYISEISPTEIRGTLGSVNQLFICIGILAALVVGLPLAGNPLWWRTMFSIAIVPSVLLAVGMVCSPESPRWLYQQGKIAEAEVSIRRLFGKERVAEVMGDL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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