Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G002282`

染色体: Chr05 坐标: 24542050-24552838 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G002282`
名称	SmilChr05G002282
描述	glutathione reductase, cytosolic-like
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	24542050 - 24552838 / `-`

ID 对照

NCBI Gene ID	`LOC131024187`
GeneID	`131024187`
locus_tag	`-`
NCBI Name	`LOC131024187`
原始查询	`LOC131024187`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	glutathione reductase, cytosolic-like
产物	glutathione reductase%2C cytosolic-like
Arabidopsis	`AT3G24170` (GR1) glutathione-disulfide reductase [Source:NCBI gene (formerly Entrezgene);Acc:822003] identity=81.8; qcov=1.01; evalue=0; confidence=high
Rice	`Os02g0813500` (OsGR2) - identity=73.6; qcov=1; evalue=0; confidence=high
GO	GO:0004362 (glutathione-disulfide reductase (NADPH) activity); GO:0005739 (mitochondrion); GO:0005829 (cytosol); GO:0006749 (glutathione metabolic process); GO:0034599 (cellular response to oxidative stress); GO:0045454 (cell redox homeostasis); GO:0050660 (flavin adenine dinucleotide binding); GO:0050661 (NADP binding)
KEGG	smil00480 (Glutathione metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage))
Pfam	PF00070 (Pyr_redox); PF02852 (Pyr_redox_dim); PF07992 (Pyr_redox_2); PF13738 (Pyr_redox_3)
InterPro	-
eggNOG	-
NR	GeneID:131024187

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	1.00000	`XP_057809676.1`
2	Cytosol	细胞质基质	0.80000	`XP_057809676.1`
3	Mitochondrion	线粒体	0.40000	`XP_057809672.1`
4	Nucleus	细胞核	0.00000	`XP_057809672.1`
5	Chromosome	染色体	0.00000	`XP_057809672.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:24542307`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B49
`Chr5:24542390`	`A`	`AGT`	2bp_insertion	frameshift_variant	20	A16,A2,A20,A6,B106,B121,B133,B139,B140,B26,B41,B61,B64,B75,B8,C15,C4,C40,C78,D11
`Chr5:24542392`	`A`	`AGT`	2bp_insertion	frameshift_variant	96	A11,A16,A19,A21,A22,A24,A3,A4,A6,A7,B10,B100,B102,B103,B109,B11,B114,B117,B12,B120,B122,B124,B127,B129,B130,B131,B132,B136,B137,B139,B14,B15,B16,B17,B18,B21,B26,B29,B34,B38,B39,B41,B42,B43,B45,B46,B47,B5,B50,B54,B55,B57,B6,B60,B63,B69,B74,B78,B80,B83,B85,B91,B95,C10,C13,C18,C19,C27,C28,C30,C31,C33,C34,C37,C41,C50,C51,C53,C54,C57,C60,C62,C64,C65,C66,C67,C69,C71,C72,C73,C76,C77,C79,C86,D5,D9
`Chr5:24547724`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B101,C22
`Chr5:24549475`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C14

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057809672.1

517 aa

258

517

Pyr_redox_2

Pyr_redox_3

Pyr_redox

Pyr_redox_dim

PF07992 Pyr_redox_2 23-350 aa PF13738 Pyr_redox_3 154-334 aa PF00070 Pyr_redox 202-277 aa PF02852 Pyr_redox_dim 371-468 aa

XP_057809674.1

517 aa

258

517

Pyr_redox_2

Pyr_redox_3

Pyr_redox

Pyr_redox_dim

PF07992 Pyr_redox_2 23-350 aa PF13738 Pyr_redox_3 154-334 aa PF00070 Pyr_redox 202-277 aa PF02852 Pyr_redox_dim 371-468 aa

XP_057809675.1

517 aa

258

517

Pyr_redox_2

Pyr_redox_3

Pyr_redox

Pyr_redox_dim

PF07992 Pyr_redox_2 23-350 aa PF13738 Pyr_redox_3 154-334 aa PF00070 Pyr_redox 202-277 aa PF02852 Pyr_redox_dim 371-468 aa

XP_057809676.1

495 aa

248

495

Pyr_redox_2

Pyr_redox_3

Pyr_redox

Pyr_redox_dim

PF07992 Pyr_redox_2 23-350 aa PF13738 Pyr_redox_3 154-334 aa PF00070 Pyr_redox 202-277 aa PF02852 Pyr_redox_dim 371-479 aa

XP_057809677.1

495 aa

248

495

Pyr_redox_2

Pyr_redox_3

Pyr_redox

Pyr_redox_dim

PF07992 Pyr_redox_2 23-350 aa PF13738 Pyr_redox_3 154-334 aa PF00070 Pyr_redox 202-277 aa PF02852 Pyr_redox_dim 371-479 aa

XP_057809678.1

495 aa

248

495

Pyr_redox_2

Pyr_redox_3

Pyr_redox

Pyr_redox_dim

PF07992 Pyr_redox_2 23-350 aa PF13738 Pyr_redox_3 154-334 aa PF00070 Pyr_redox 202-277 aa PF02852 Pyr_redox_dim 371-479 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057809672.1`	Pfam	`PF07992`	Pyr_redox_2	Domain	23	350	7.6e-72	242.9	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809672.1`	Pfam	`PF13738`	Pyr_redox_3	Family	154	334	2.5e-13	50.7	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809672.1`	Pfam	`PF00070`	Pyr_redox	Domain	202	277	7.7e-20	71.9	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809672.1`	Pfam	`PF02852`	Pyr_redox_dim	Domain	371	468	3.8e-27	95.4	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
`XP_057809674.1`	Pfam	`PF07992`	Pyr_redox_2	Domain	23	350	7.6e-72	242.9	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809674.1`	Pfam	`PF13738`	Pyr_redox_3	Family	154	334	2.5e-13	50.7	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809674.1`	Pfam	`PF00070`	Pyr_redox	Domain	202	277	7.7e-20	71.9	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809674.1`	Pfam	`PF02852`	Pyr_redox_dim	Domain	371	468	3.8e-27	95.4	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
`XP_057809675.1`	Pfam	`PF07992`	Pyr_redox_2	Domain	23	350	7.6e-72	242.9	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809675.1`	Pfam	`PF13738`	Pyr_redox_3	Family	154	334	2.5e-13	50.7	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809675.1`	Pfam	`PF00070`	Pyr_redox	Domain	202	277	7.7e-20	71.9	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809675.1`	Pfam	`PF02852`	Pyr_redox_dim	Domain	371	468	3.8e-27	95.4	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
`XP_057809676.1`	Pfam	`PF07992`	Pyr_redox_2	Domain	23	350	6.8e-72	243.1	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809676.1`	Pfam	`PF13738`	Pyr_redox_3	Family	154	334	2.2e-13	50.8	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809676.1`	Pfam	`PF00070`	Pyr_redox	Domain	202	277	7e-20	72.0	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809676.1`	Pfam	`PF02852`	Pyr_redox_dim	Domain	371	479	2.8e-31	108.7	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
`XP_057809677.1`	Pfam	`PF07992`	Pyr_redox_2	Domain	23	350	6.8e-72	243.1	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809677.1`	Pfam	`PF13738`	Pyr_redox_3	Family	154	334	2.2e-13	50.8	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809677.1`	Pfam	`PF00070`	Pyr_redox	Domain	202	277	7e-20	72.0	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809677.1`	Pfam	`PF02852`	Pyr_redox_dim	Domain	371	479	2.8e-31	108.7	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
`XP_057809678.1`	Pfam	`PF07992`	Pyr_redox_2	Domain	23	350	6.8e-72	243.1	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809678.1`	Pfam	`PF13738`	Pyr_redox_3	Family	154	334	2.2e-13	50.8	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809678.1`	Pfam	`PF00070`	Pyr_redox	Domain	202	277	7e-20	72.0	Pyridine nucleotide-disulphide oxidoreductase
`XP_057809678.1`	Pfam	`PF02852`	Pyr_redox_dim	Domain	371	479	2.8e-31	108.7	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

6 records

下载 cDNA FASTA

XM_057953693.1
CTAAAAGGACTAAAAGGACATGCAATTATTTCTCTCTCACATACCCACACACACATACACACGCTCAGTTCGTGGCCGCCTCTGTCATTAGGCTCTCGAGGTTACAGTCTTAAAAATTTCGAACTCTCGTCAGAAACAACTCAAGAAGAGAGAGACAATCAATTCCGTACTCTCTTCATTGATTCCTCTCACACAGATACGGCTATTCGGGATATTTTCTTCCCTTGATTTCTTTCTGTATCCCATAAGTTAAGAAGAAG...

XM_057953689.1
CTAAAAGGACTAAAAGGACATGCAATTATTTCTCTCTCACATACCCACACACACATACACACGCTCAGTTCGTGGCCGCCTCTGTCATTAGGCTCTCGAGGTTACAGTCTTAAAAATTTCGAACTCTCGTCAGAAACAACTCAAGAAGAGAGAGACAATCAATTCCGTACTCTCTTCATTGATTCCTCTCACACAGATACGGCTATTCGGGATATTTTCTTCCCTTGATTTCTTTCTGTATCCCATAAGTTAAGAAGAAG...

CDS

6 records

下载 CDS FASTA

LOC131024187
ATGGCAAGGAAGATGCTTATTGACGGGGAGTTGGACAAAACCAGTGAGGTGGAGAGTCACTATGACTTCGATTTGTTCGTCATCGGGGCAGGCAGTGGTGGGGTCCGTGCATCCAGGTTTTCAGCCCAGAATGGAGCTAAGGTAGGTATCTGTGAGCTTCCATTTCATCCTATCAGCTCTGAAGTTATTGGAGGAGTTGGCGGAACGTGTGTGATTCGTGGCTGTGTTCCTAAAAAGATTTTGGTATATGGTGCTTCTTT...

Protein

6 records

下载 Protein FASTA

XP_057809672.1
MARKMLIDGELDKTSEVESHYDFDLFVIGAGSGGVRASRFSAQNGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGPELEDARNYGWDVNERVDFNWKKLLQKKTEEINRLNGIYKRLLSGAGVKLFEGEGRVIGPNEVEVIQLDGTKISYSAKHILIATGSRAQRPPIPGQELGITSDEALSLEELPKHAIILGGGYIAVEFASIWRGMGAKVDLFYRKELPLRGFDDEMREVVARNLEGRGINLHP...

XP_057809674.1
MARKMLIDGELDKTSEVESHYDFDLFVIGAGSGGVRASRFSAQNGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGPELEDARNYGWDVNERVDFNWKKLLQKKTEEINRLNGIYKRLLSGAGVKLFEGEGRVIGPNEVEVIQLDGTKISYSAKHILIATGSRAQRPPIPGQELGITSDEALSLEELPKHAIILGGGYIAVEFASIWRGMGAKVDLFYRKELPLRGFDDEMREVVARNLEGRGINLHP...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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