当前解析结果
SmilChr01G002181| 统一新 Gene ID | SmilChr01G002181 |
|---|---|
| 名称 | SmilChr01G002181 |
| 描述 | uncharacterized SmilChr01G002181 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 37944382 - 37947062 / - |
| NCBI Gene ID | LOC131024191 |
|---|---|
| GeneID | 131024191 |
| locus_tag | - |
| NCBI Name | LOC131024191 |
| 原始查询 | LOC131024191 |
| 来源 | GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:NCBI gene (formerly Entrezgene);Acc:844102]; symbol=AT1G77660; hit=AT1G77660; species=arabidopsis; confidence=high |
| 产物 | Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:NCBI gene (formerly Entrezgene);Acc:844102]; symbol=AT1G77660; hit=AT1G77660; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G77660 (AT1G77660)Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:NCBI gene (formerly Entrezgene);Acc:844102] identity=60.7; qcov=1.02; evalue=8.34e-164; confidence=high |
| Rice | Os09g0453900 (P0488D02.28-1)- identity=71.2; qcov=0.651; evalue=2.11e-136; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | PF02493 (MORN) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131024191 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 0.40000 | XP_057809687.1 |
| 2 | Chloroplast membrane | 叶绿体膜 | 0.40000 | XP_057809687.1 |
| 3 | Nucleus membrane | 核膜 | 0.20000 | XP_057809687.1 |
| 4 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057809687.1 |
| 5 | Chloroplast | 叶绿体 | 0.20000 | XP_057809687.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:37944842 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C47,C51 |
Chr1:37944845 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B138 |
Chr1:37945021 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B26 |
Chr1:37945182 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C47,C51 |
Chr1:37946040 |
GC |
G |
1bp_deletion | frameshift_variant | 1 | B90 |
Chr1:37946040 |
GC |
G |
1bp_deletion | CDS_variant | 1 | B90 |
Chr1:37946042 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B90 |
Chr1:37946368 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A18,B53 |
Chr1:37946387 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B13 |
Chr1:37946618 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B25 |
Chr1:37946638 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B107 |
Chr1:37946660 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B32 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057809687.1PF02493
MORN 187-205 aa
PF02493
MORN 210-231 aa
PF02493
MORN 233-254 aa
PF02493
MORN 256-277 aa
PF02493
MORN 279-301 aa
PF02493
MORN 304-323 aa
PF02493
MORN 325-345 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057809687.1 |
Pfam | PF02493 |
MORN | Repeat | 187 | 205 | 1.2e-38 | 129.3 | MORN repeat |
XP_057809687.1 |
Pfam | PF02493 |
MORN | Repeat | 210 | 231 | 1.2e-38 | 129.3 | MORN repeat |
XP_057809687.1 |
Pfam | PF02493 |
MORN | Repeat | 233 | 254 | 1.2e-38 | 129.3 | MORN repeat |
XP_057809687.1 |
Pfam | PF02493 |
MORN | Repeat | 256 | 277 | 1.2e-38 | 129.3 | MORN repeat |
XP_057809687.1 |
Pfam | PF02493 |
MORN | Repeat | 279 | 301 | 1.2e-38 | 129.3 | MORN repeat |
XP_057809687.1 |
Pfam | PF02493 |
MORN | Repeat | 304 | 323 | 1.2e-38 | 129.3 | MORN repeat |
XP_057809687.1 |
Pfam | PF02493 |
MORN | Repeat | 325 | 345 | 1.2e-38 | 129.3 | MORN repeat |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。